Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00654 ATGTCGACCTCGACGAACGTGGTAGTCCTGGACAACGGCGGCGGGCTGATCAAGGCGGGCATCGGCGGCGAGCGCGACCCCTCCGCCATAGTCCCGAACTGCCTCTACCGCCCCCCGTCGTCGAAGAAGTGGCTCCACCTCCACTCCGGCGACGAGGACCTCACCTCCGCCGCCGTGCGCCGCCCCATGGACCGCGGCTACCTCATAAACCCCGACCTCCAGCGCGAAATCTGGTCCCACCTCTTCTCTTCCGTCCTCCACATAAACCCTTCCCAGTCCTCGCTCCTCCTCACGGAGCCTCTCTTCACTCCCCCCTCCATCCAGCGCTCGGTGGACGAGCTCGTCTTCGAGGACTTCAACTTCCGGGCCCTGTACGTGGCCCACTCCCCCTCCCTCGTCCACCTCCACGAGGCCAGCCGCAACAACGCCAACGGGCTCCTCTCCAAGGCCCAGTGCAGCCTCGTCCTCGACGCCGGGTTCTCCTTCACCCACGCCTCCCCCGTCTTCCACAACTTCGCCCTCAACTACGCCGTCAAGAGGATCGACCTCGGCGGCAAGGCCCTCACCAACTACCTCAAGGAGCTCGTCTCCTTCCGCTCCGTTAATGTCATGGAAGAGACCTTCATCATCGACGACGTCAAGGAGAAACTCTGCTTTGTCTCACTCGACGTCAACCGCGACCTCACCATCGCCAGGAAGAGTGGGAAAGAGAATCTGTTCAGGTGCACCTACGTGCTTCCGGATGGTGTCACGTACACAAAGGGGTTTGTTAAGTATCCAGATCAGGCGCAGCGATATCTTGCATTGAGGGAGGGTGGCCTTCATTCTTCATCACCAGTGCAAGCGCAGGAGGATGTGAATTTCACGGAAATTGCCGAGCACCCAGAGAACAGGAAGAGAGTTGATTTGACAAAAAATGAATTTGACTTGACAAATGAACGGTTTCTTGTGCCAGAGATGATCTTCCGTCCTGCTGATTTGGGAATGAACCAGGCTGGGCTAGCAGAATGCATTGTACGTGCTGTTAATGCGTGCCATCCACATCTCCGCCCTGTTCTCTATGAAAGCATCATTTTAACTGGTGGAAGCACCTTATTTCCTCAGTTTGCCGAGAGACTAGAGAAGGAGCTTCGGCCTCTAGTTCCTGATGACTATCGTGTGAAGATAACGACTCAAGAAGATCCCATACTAGGTGTTTGGCGTGGAGGTTCACTGTTGGCATCAAGTCCGGATTTTGAAGCTATGTGTGTGACCAAGTCTGAGTATGAGGAGCTTGGTTCTGCTAGATGTCGCAAGAGATTCTTTCATTAA 1311 0.5591 MSTSTNVVVLDNGGGLIKAGIGGERDPSAIVPNCLYRPPSSKKWLHLHSGDEDLTSAAVRRPMDRGYLINPDLQREIWSHLFSSVLHINPSQSSLLLTEPLFTPPSIQRSVDELVFEDFNFRALYVAHSPSLVHLHEASRNNANGLLSKAQCSLVLDAGFSFTHASPVFHNFALNYAVKRIDLGGKALTNYLKELVSFRSVNVMEETFIIDDVKEKLCFVSLDVNRDLTIARKSGKENLFRCTYVLPDGVTYTKGFVKYPDQAQRYLALREGGLHSSSPVQAQEDVNFTEIAEHPENRKRVDLTKNEFDLTNERFLVPEMIFRPADLGMNQAGLAECIVRAVNACHPHLRPVLYESIILTGGSTLFPQFAERLEKELRPLVPDDYRVKITTQEDPILGVWRGGSLLASSPDFEAMCVTKSEYEELGSARCRKRFFH 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00654 436 PANTHER ACTIN 8 432 IPR004000 -
Gma04g00654 436 CDD NBD_sugar-kinase_HSP70_actin 8 195 - -
Gma04g00654 436 PANTHER ACTIN-RELATED PROTEIN 6 8 432 IPR030054 GO:0005634|GO:0006338
Gma04g00654 436 Gene3D Actin; Chain A, domain 4 191 339 - -
Gma04g00654 436 SUPERFAMILY Actin-like ATPase domain 151 435 IPR043129 -
Gma04g00654 436 Pfam Actin 4 435 IPR004000 -
Gma04g00654 436 Gene3D - 130 406 - -
Gma04g00654 436 SMART actin_3 5 435 IPR004000 -
Gma04g00654 436 Gene3D - 8 427 - -
Gma04g00654 436 SUPERFAMILY Actin-like ATPase domain 4 134 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00654 Gma-Chr4 6042628 6048531 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00654 8 435 Cytoskeleton Gene Families AT5G59370 27.169 3.47e-53 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00654 K11662 - gmx:100819827 874.774