Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00644 ATGGAGGAAATTGAAGGGGTGAATTGTTGCAGTGAAAGTGAAAGTAGGAGCTCCAGTGAGACTCGACCTCCCAATCCCAACCCACCTTCATATCGCCAATGCAAACTTGTTCGCCACGCTTCCCTCCAGATGAAAACAAAGTTGTCTGATGTATCTGCTGAGCCGGGGCATGTTACTGAAGATTGTCAGTCTGATTTCTTTCCAACGCTTCGTTCTGGAGCTTGCGCTGATATTGGATTCCGGTCTAATATGGAAGATGTATATGTTTGTGCTGACAATTTTATGGTGGATTATGGACTCAAGAACCATATAGATGGACCCAGTGCTTTCTATGGGGTATTTGATGGACATGGTGGAAAGCATGCTGCTGACTTTGCTTGTCATCATCTGCCAAAGTTCATTGTTGATGACGAAGATTTCCCTAGAGATATTGAAAGGATAGTTGCTTCAGCATTTCTGCAAACAGACAATGCCTTTGCAGAAGCTTGCTCTCTGGATGCTGCACTTGCATCTGGCACCACTGCATTAGCTACActtgttataggaagGTTGCTGGTGGTGGCAAATGCTGGAGATTGTCGAGCTGTGCTGTGCCGTCGTGGAAAAGCAATTGAAATGTCAAGAGATCATAAACCGGGTTGCAATAAAGAGAAGAAGCGTATTGAGGCATCTGGGGGGTATGTCTATGATGGATATCTCAACGGACAACTTAATGTTGCTCGTGCACTTGGTGACTGGCACATGGAAGGAATGAAGAGCAAAGACGGTGGACCACTGACTGCAGAACCTGAACTTATGACTACAAAACTGACCACCGAGGATGAATTTCTCATCATAGGTTGTGATGGGATTTGGGATGTATTTAGGAGCCAAAATGCAGTGGATTTTGCTCGGCGCAGGCTTCAGGAGCATAATGACCCGGCCATGTGTAGTAAGGATCTGGTTGATGAGGCTTTAAAGAGAAAAAGTGGAGACAATTTGGCTGCAGTTGTGGTTTGCTTCCAGCAGCAACCTCCTCCTAACTTGGTGGCACCACGCTCTAGAGTGCAACGGAGCTTCTCTGCTGAAGGTTTGAAGGAGTTGCAAAGCTTCCTGGACAGCTTGAGTAATTGA 1113 0.4555 MEEIEGVNCCSESESRSSSETRPPNPNPPSYRQCKLVRHASLQMKTKLSDVSAEPGHVTEDCQSDFFPTLRSGACADIGFRSNMEDVYVCADNFMVDYGLKNHIDGPSAFYGVFDGHGGKHAADFACHHLPKFIVDDEDFPRDIERIVASAFLQTDNAFAEACSLDAALASGTTALATLVIGRLLVVANAGDCRAVLCRRGKAIEMSRDHKPGCNKEKKRIEASGGYVYDGYLNGQLNVARALGDWHMEGMKSKDGGPLTAEPELMTTKLTTEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPAMCSKDLVDEALKRKSGDNLAAVVVCFQQQPPPNLVAPRSRVQRSFSAEGLKELQSFLDSLSN 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00644 370 SMART PP2C_4 61 332 IPR001932 -
Gma04g00644 370 CDD PP2Cc 71 334 IPR001932 -
Gma04g00644 370 MobiDBLite consensus disorder prediction 1 32 - -
Gma04g00644 370 ProSitePatterns PPM-type phosphatase domain signature. 110 118 IPR000222 GO:0043169
Gma04g00644 370 ProSiteProfiles PPM-type phosphatase domain profile. 71 334 IPR001932 -
Gma04g00644 370 Gene3D - 51 338 IPR036457 -
Gma04g00644 370 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 60 356 - -
Gma04g00644 370 PANTHER PROTEIN PHOSPHATASE 2C 60 356 IPR015655 GO:0004722|GO:0006470
Gma04g00644 370 SUPERFAMILY PP2C-like 66 336 IPR036457 -
Gma04g00644 370 Pfam Protein phosphatase 2C 73 326 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00644 Gma-Chr4 5924835 5927985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00644 1 370 PP2C-type Phosphatase Gene Family AT2G25620 66.919 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00644 K14803 - gmx:100815725 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00644 04 5924835 5927985 Gma04g00644 04 5924835 5927985 ECH
Gma04g00644 04 5924835 5927985 Gma06g00637 06 5748854 5752043 GST