Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00635 ATGACCAAGAAGAAGAATCCCCTGGTGTTTATGGATGTGTCCATCGATGGGGATCCTGTTGAAAGGATGGTTTTTGAGCTTTTCTATGATGTTGCTCCCAAGACTGCAGAAAACTTTCGTGCATTATGTACAGGAGAAAAAGGTATCAGTCCAAATACTGGAAAATCACTGCACTACAAGGGTTCTTTCTTCCATCAGATCATAAAAGGTTCCATTGTGCAGGGTGGAGATTTTGTCAATCGAAATGGAACTGCTGGAGAAAGCATATATGGTTCGAAGTTCCCAGATGAGTCACCTAAGCTAAAGCATGATGCTACCGGACTTTTATCAATGGCAATTGCAGACCGTGACACACTTGGTTCTCATTTTATTATCACTTTGAAAGCTGATCATCATCTTGATAGGAAGCATGTAGTCTTTGGGAAGCTTGTCCAAGGGCCTAACGTATTGAAGAAAATTGAAGAAGTGGGTGATGAAGAAGGGCATCCAACTGTAACAGTTAAAATCATTAATTGTGGTGAATATAGCGAGGATGGAAAGAAGGTAAATAAATCAAAAATGGGAAAGAATAAAAAATCTTCAAAAGACAGAAGGAAAAGGAGAAAATACTACTCATCCAAATCAGGAAGCTCTTCAGATTCTGATACAGAATCTTCGGAAACTGATAGTGATTCTGAGTCAGATATGTCCTCATCGTCTTACATAAGTTCTTCCAGTGATGACAGGCGAAGGAAGAGAAAGAGATCTAAGAAAGATAAATATAGACGGGAAAAAAGAAGAGATAAACGTCGTGACAAGAAGCGAAGGAAAAAGGACAAGAGATCAAAGCGTAAATCAAAAAGGGAATCCGGTAGTGACTCAGATAGTGAGAGTAACAGTGACAGTAGCTCTGAAGGTGAAGGTATTGGTGCTCAACATAAAGGGCTGAAGCTTAAAGATCATTCTCAGAAAAATGCTGAAACAAGGTCTGCCTTGGTTGCTGAGAAAGATTTGCCTCCTGCGCATCATGAAAAGGAGGAAGTGGGTATGCTAGAAAATGAGGAAAAATTCTCAAAGGAAAACGGAGAGCAACGCAGCAATGGCATTGGAGGAGCTGACTATGGATCTGACAGAAGTGAAGAGAGGCAGCCTGACGTTATGGATGATCATTCAGGCAAAACTAGGAGTCGAAGTGTGAGTCCTAAGCGACCCATCAGTAAGAGTATGAGTATTAGTCCCAGGAGGAGTGCgagattgagcaagagcccaagtgttactccaaaaaggagattgagcaagagcccaagtgttactccaaaaaggagattgagcaaaagtccaagtgttaGAAGCCCTCCTCCATCACAGAGGAGTTTGagcagaagtcccgccagaagcatcagcaggagtccaagcagaagcatcagtagaagcccagtgagaggcaggaatgggagaagtgtcagtagaagccctgtgagaggcaggaatgggagaagtgtcagtagaagccctgtgagagtcaggaatgggagaagtgtcagtagaagctcagtaagagtcaggaatgggagaagtgtcagtagaagcccagtaagagtcaggaatgggagaagtgtcagtagaagcccagtgagaggcaggaattggagaagtgtcagtagaagcccagtgagaggcaggaatggtagaagtgtcagtagaagcccTGCGAGAACTCGTTCTCTTAGAAGTGTCAGCAAGAGCCCTGTAAGATCCCATTCTCGAAGTCACCGGAGCAGGAGTTCTCCTAGAGCACCATCAGGAAAAATTATCAGCAAAAGCCCTGTAAGAGTATTGAGAAAGAGTATAAGCCGCAGTCCAGTTAGATCACCTGCAAGAAGTTTAAGCCGAAGCTCTGGCAGGGTTCCTTCAAAGAAAAGCATCAGCCGAAGCCCGGTCAGAGCACCTAGTAGAAGCAATCGCCGCAGTTTTTCTAGGAGTCCTAGCCCTGTTCATAGGACAAGGACTCCTCGTGGGAGGAGTGTGTCAAGGAGTGTATCACCTGATGCTTCACCAAAGCGTATCAGAAGGGGAAGAGGTTTCAGTGAAAGATACTCTTATGCAAGAAGGTATAGAACCCCCTCTCGGTCTCCTGTGAGGTCATACCGCTACAATGGAAGAAATGACCGGGACAGATATTCTACTTACAGAAGGTTTTCCCCTAGGCGTTTCAGGAGCCCACCACCACGTGGAAGAACTCCCCCAAGGTATCGAAGCAGGAGGAGCAGGACGCCATCTGTTTCACGCAGTCCACGATATCGAGCCCGACGATATAGCCGAAGTAGGAGCCCGGTTCGCAGTCGTTCCCTAGTTGATAGATCCCGCCCCTCTCGTGTGGAGAGGCATGCATCTTCTTCTCGGAGCAGGAGTCCATCAAAATCCCGGTCTAGGTCCAGGTCATCCGTGGAGTCTCCGCCAAGAGCAAGTAGAGACAGCAGGTCCAGGTCATCGTCCAGAAGCCCTGATGGAAAGCAAGGCTTGGTCTCATATGGCGATGGTTCTCCATACTAA 2532 0.3772 MTKKKNPLVFMDVSIDGDPVERMVFELFYDVAPKTAENFRALCTGEKGISPNTGKSLHYKGSFFHQIIKGSIVQGGDFVNRNGTAGESIYGSKFPDESPKLKHDATGLLSMAIADRDTLGSHFIITLKADHHLDRKHVVFGKLVQGPNVLKKIEEVGDEEGHPTVTVKIINCGEYSEDGKKVNKSKMGKNKKSSKDRRKRRKYYSSKSGSSSDSDTESSETDSDSESDMSSSSYISSSSDDRRRKRKRSKKDKYRREKRRDKRRDKKRRKKDKRSKRKSKRESGSDSDSESNSDSSSEGEGIGAQHKGLKLKDHSQKNAETRSALVAEKDLPPAHHEKEEVGMLENEEKFSKENGEQRSNGIGGADYGSDRSEERQPDVMDDHSGKTRSRSVSPKRPISKSMSISPRRSARLSKSPSVTPKRRLSKSPSVTPKRRLSKSPSVRSPPPSQRSLSRSPARSISRSPSRSISRSPVRGRNGRSVSRSPVRGRNGRSVSRSPVRVRNGRSVSRSSVRVRNGRSVSRSPVRVRNGRSVSRSPVRGRNWRSVSRSPVRGRNGRSVSRSPARTRSLRSVSKSPVRSHSRSHRSRSSPRAPSGKIISKSPVRVLRKSISRSPVRSPARSLSRSSGRVPSKKSISRSPVRAPSRSNRRSFSRSPSPVHRTRTPRGRSVSRSVSPDASPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRNDRDRYSTYRRFSPRRFRSPPPRGRTPPRYRSRRSRTPSVSRSPRYRARRYSRSRSPVRSRSLVDRSRPSRVERHASSSRSRSPSKSRSRSRSSVESPPRASRDSRSRSSSRSPDGKQGLVSYGDGSPY 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00635 843 MobiDBLite consensus disorder prediction 329 355 - -
Gma04g00635 843 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Gma04g00635 843 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Gma04g00635 843 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Gma04g00635 843 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Gma04g00635 843 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Gma04g00635 843 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Gma04g00635 843 MobiDBLite consensus disorder prediction 185 205 - -
Gma04g00635 843 MobiDBLite consensus disorder prediction 796 810 - -
Gma04g00635 843 MobiDBLite consensus disorder prediction 710 725 - -
Gma04g00635 843 MobiDBLite consensus disorder prediction 614 675 - -
Gma04g00635 843 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 321 - -
Gma04g00635 843 MobiDBLite consensus disorder prediction 368 389 - -
Gma04g00635 843 MobiDBLite consensus disorder prediction 178 843 - -
Gma04g00635 843 MobiDBLite consensus disorder prediction 811 825 - -
Gma04g00635 843 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 173 IPR002130 GO:0000413|GO:0003755
Gma04g00635 843 MobiDBLite consensus disorder prediction 391 576 - -
Gma04g00635 843 MobiDBLite consensus disorder prediction 305 319 - -
Gma04g00635 843 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 ISOFORM X1 1 321 - -
Gma04g00635 843 MobiDBLite consensus disorder prediction 677 697 - -
Gma04g00635 843 SUPERFAMILY Cyclophilin-like 4 176 IPR029000 -
Gma04g00635 843 MobiDBLite consensus disorder prediction 773 794 - -
Gma04g00635 843 Gene3D - 1 175 IPR029000 -
Gma04g00635 843 MobiDBLite consensus disorder prediction 243 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00635 Gma-Chr4 5821157 5827751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00635 26 170 U-box Gene Family AT5G67530 40.816 2.19e-20 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00635 K09566 - gmx:100785820 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00635 04 5821157 5827751 Gma04g00635 04 5821157 5827751 ECH