Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00631 ATGGCTGTGGTTTTTCAGTGTTTATGGTGTGCTCGGAGTGACCCCTTCCTCACTCTTCCTTTCCAACGCAAACCACTTCTTTGCTCTGTCTTTCTTTCCTCTCGCCCTCGTAACCTCTGCTCTTCAATTGTCGCTGCTGCTTCCAAAAACAAAAACAAGCAAAAAAAGTCTCGTGATCATGTTACTAAGGACGATGAAGATGGCGTGGACGCTTTTGAGCTGCTCTTCAAGCAACTCGAAGAAGATCTCAAACGCGGTGATTTGTCAGACGATGATGGTGAGGATGAGATAAGTGAAGAAGACATGGCATTGCTTGAACGTGAGTTGGAAAATGCTTTGGGGGACTTTGATGGTGAATTGTTAAACTCGGATGTAATCGACATCGAAACTGGCGGTGATCCAGAAAATGATGATGATATTGAGGATGGTGGAGATGAAAGGTCACTGAACCTTAGGAATTGGCAGATGAAGAAATTGGCTAGAGCCTTAAAAGCTGGCCGCCGCAAAACAAGTATAAAAAATCTTGCTGCCGATCTTTGTCTTGATAGGGCTCTTGTTCTTCAATTGCTTCGTGACCCTCCTCCAAATCTTTTAATGATGAGTCTATCAATACCTGATGAACCCACAACGACTGTAGTATCACTTGAAACTAAGCCCAGTGAGATTGTTCATAAAGAAACAAGTATTGATCATGCAGAAATAGAATCTGAACCTAAGGCTAAAGTACCTGTTCATACCTTGCAACGTAATTGGCATGCTCAAAAGCGACTGAAAAAGGCCCATGTTGACACTTTGGAGAGAGTTTATAGGAGATCAAAACGACCCACTAATGCAATGATCAGTAGTATCGTACATGTAACAAACATTCCTCGAAAAAAAGTTGTTAAGTGGTTTGAAGACAAACGTGCTGAGGAGGGAGTTCCAGATCGCCGTGTTCCTTACCAGCGCTCTGTTCCTGAAACTGCATGA 969 0.4303 MAVVFQCLWCARSDPFLTLPFQRKPLLCSVFLSSRPRNLCSSIVAAASKNKNKQKKSRDHVTKDDEDGVDAFELLFKQLEEDLKRGDLSDDDGEDEISEEDMALLERELENALGDFDGELLNSDVIDIETGGDPENDDDIEDGGDERSLNLRNWQMKKLARALKAGRRKTSIKNLAADLCLDRALVLQLLRDPPPNLLMMSLSIPDEPTTTVVSLETKPSEIVHKETSIDHAEIESEPKAKVPVHTLQRNWHAQKRLKKAHVDTLERVYRRSKRPTNAMISSIVHVTNIPRKKVVKWFEDKRAEEGVPDRRVPYQRSVPETA 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00631 322 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 42 317 - -
Gma04g00631 322 SMART HOX_1 254 312 IPR001356 GO:0003677
Gma04g00631 322 Gene3D - 250 309 - -
Gma04g00631 322 CDD homeodomain 254 303 IPR001356 GO:0003677
Gma04g00631 322 PANTHER HOMEOBOX PROTEIN 8 42 317 - -
Gma04g00631 322 SUPERFAMILY Homeodomain-like 250 314 IPR009057 -
Gma04g00631 322 MobiDBLite consensus disorder prediction 303 322 - -
Gma04g00631 322 ProSiteProfiles 'Homeobox' domain profile. 248 308 IPR001356 GO:0003677
Gma04g00631 322 Pfam Homeodomain 256 304 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00631 Gma-Chr4 5780949 5784093 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Gma04g00631 Homeodomain 8.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00631 - - gmx:100784216 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00631 04 5780949 5784093 Gma04g00631 04 5780949 5784093 ECH
Gma04g00631 04 5780949 5784093 Gma06g00619 06 5601949 5605363 GST