Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00618 ATGGAAATACATTGGCCTTTCTTCCATATTACGGGTACCCTTTTCCTTTTGTGCAAAGTTTGTTTAGCCGGAATTCAATATTCTGGAAGTGTCTCACCCGGAATAATAAATGGTTCTCAAATGAATTGGATTGACAGAGATGGCAAGTTCCTTGTCTCAAAAGAGGGACAATTTGCCTTTGCCTTTGTCGCCACTGCAAATGACTCCACCAAGTTTCTTCTTGCAATCGTCCACGTGGCCACTGAAAGGGTAATTTGGACCGCCAATAGAGCAGTTCCTGTTGCTAACTCAGACAATTTTGTGTTTGATGAAAAGGGCAACGCTTTCTTAGAGAAAGATGGAACCTTGGTTTGGTCCACAAACACAAGTAACAAAGGGGTTTCTTCAATGGAATTGCTTGACACAGGGAACTTGGTTTTGCTTGGGAGTGATAATAGTACAGTGATTTGGCAGAGTTTCAACCATCCAACAGATACTTTGTTGCCAACTCAGGAGTTCACTGAGGGAATGAAACTCATCAGTGATCCTAGCACGAACAACCTGACCCATTTTCTTGAGATCAAGTCTGGTAATGTTGTTCTCACCGCAGGTTTTCGAACCTTGCAGCCTTATTGGACTATGCAGAAGGACAACCGCAAAGTCATTAATAAGGACGGTGATGCGGTGGCTTCAGCAAACATTAGTGGAAACTCATGGAGGTTCTATGGCAAAAGCAAATCACTGTTGTGGCAATTCATTTTCTCTACAGACCAAGGCACAAATGCGACTTGGATTGCTGTTTTGGGGAGTGATGGCTTCATTACTTTCTCAAACCTCAACGGTGGAGAGTCAAATGCTGCTTCTCAAAGAATACCCCAAGATTCTTGTGCTACACCGGAACCTTGTGATGCATACACCATATGCACAGAAAAGTCCATTCAGTTGGTTAAAGCTGATGATGGACTCGATTACTTTGCGCTTCAATTCCTTCAACCTTTTTCGATAACCGATTTGGCTGGTTGCCAATCTTCTTGCCGTGGAAATTGTTCATGCCTTGCTTTGTTCTTCCACATAAGTTCAGGGGACTGTTTCCTTTTGAACAGTGTAGGAAGCTTTCAGAAACCTGATTCTGATTCTGGTTATGTTTCTTACATCAAGGTCTCGACGGTTGGAGGTGCTGGCACGGGTTCTGGGGGCAGTGGAGGTGGCAATAAGCACACCATAGTTGTTGTGGTCATTGTCATAATAACCTTGCTTGTCATTTGTGGTCTGGTCTTTGGGGGAGTTAGATACCACAGAAGAAAGCAAAGGTTGCCCGAGTCTCCTAGAGATGGTTCAGAAGAGGACAATTTCTTGGAGAATTTAACTGagatCATTGGGGGAAGGAAAAACTATGATCCTAGAGAGAGTTCAGAGAAATCCCATTTCCCAACTTATGCATTTAAGATGATGGAAGAAGGGAAGCTGAGAGATATTTTTGACTCGGAGTTGGAAATTGATGAGAATGATGATAGGTTTCAATGTGCTATCAAAGTTGCATTGTGGTGCATTCAGGAAGACATGTCAATGAGGCCATCTATGACCAGGGTTGTCCAAATGTTGGAGGGTATTTGTATTGTTCCTAAGCCACCAACTAGTTCTTCCTTGGGTTCTCGCCTTTATGCCACTATGTTCAAATCCTCCAGTGAAGAAGGGGCCACCTCTTCTGCTCCCTCAGACTGTAACAGTGATGCTTATCTCTCCGCGGTTAGAAATTGTACCCTCCTATATCATGACATGTTTTGGCCTTCTATTCAAGCCATTTCGTTATCAGGTACAAAGGAATATCTTCTCATTAAAGAAGAGGTGAGGAAGGTCTTGTCAAAGGGAAAGGCTGCTGGCGTGCTTCGATTGGTTTTCCTCGATGCCGGAACCTTTGACATCGATGACAGTACAGGTTCTGCAACAAGCAAAGACTCAGATAGATGTTATCCAACCAAATATTCTTCTATCTGGGTGCATGATCCAGAAGGGAGACTTCCTGAGGAATCTCTCAATGCTTCTGGTTTGAAGAAATGTTTCCAGAGCAAAGGCTTTTTAAGCAAGAAATATTGTGATAAAGTCCCGATTCTAAACCAGACTAACAAGGCAAGAAATATTGTGATTTACTGA 2130 0.4296 MEIHWPFFHITGTLFLLCKVCLAGIQYSGSVSPGIINGSQMNWIDRDGKFLVSKEGQFAFAFVATANDSTKFLLAIVHVATERVIWTANRAVPVANSDNFVFDEKGNAFLEKDGTLVWSTNTSNKGVSSMELLDTGNLVLLGSDNSTVIWQSFNHPTDTLLPTQEFTEGMKLISDPSTNNLTHFLEIKSGNVVLTAGFRTLQPYWTMQKDNRKVINKDGDAVASANISGNSWRFYGKSKSLLWQFIFSTDQGTNATWIAVLGSDGFITFSNLNGGESNAASQRIPQDSCATPEPCDAYTICTEKSIQLVKADDGLDYFALQFLQPFSITDLAGCQSSCRGNCSCLALFFHISSGDCFLLNSVGSFQKPDSDSGYVSYIKVSTVGGAGTGSGGSGGGNKHTIVVVVIVIITLLVICGLVFGGVRYHRRKQRLPESPRDGSEEDNFLENLTEIIGGRKNYDPRESSEKSHFPTYAFKMMEEGKLRDIFDSELEIDENDDRFQCAIKVALWCIQEDMSMRPSMTRVVQMLEGICIVPKPPTSSSLGSRLYATMFKSSSEEGATSSAPSDCNSDAYLSAVRNCTLLYHDMFWPSIQAISLSGTKEYLLIKEEVRKVLSKGKAAGVLRLVFLDAGTFDIDDSTGSATSKDSDRCYPTKYSSIWVHDPEGRLPEESLNASGLKKCFQSKGFLSKKYCDKVPILNQTNKARNIVIY 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00618 709 Gene3D - 41 154 IPR036426 -
Gma04g00618 709 SUPERFAMILY WD40 repeat-like 111 276 IPR036322 GO:0005515
Gma04g00618 709 CDD B_lectin 44 156 IPR001480 -
Gma04g00618 709 Gene3D Transferase(Phosphotransferase) domain 1 447 534 - -
Gma04g00618 709 ProSiteProfiles Bulb-type lectin domain profile. 36 153 IPR001480 -
Gma04g00618 709 SMART blect_4 42 156 IPR001480 -
Gma04g00618 709 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 4 302 - -
Gma04g00618 709 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 304 450 - -
Gma04g00618 709 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 448 578 - -
Gma04g00618 709 SUPERFAMILY Protein kinase-like (PK-like) 449 553 IPR011009 -
Gma04g00618 709 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 174 IPR036426 -
Gma04g00618 709 CDD PAN_AP_plant 326 381 - -
Gma04g00618 709 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 304 450 - -
Gma04g00618 709 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 448 578 - -
Gma04g00618 709 Pfam D-mannose binding lectin 84 167 IPR001480 -
Gma04g00618 709 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 4 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00618 Gma-Chr4 5653411 5658391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00618 448 539 Receptor kinase-like Gene Family AT5G20050 40.000 6.72e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00618 - - gmx:100782258 865.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00618 04 5653411 5658391 Gma04g00618 04 5653411 5658391 ECH
Gma04g00618 04 5653411 5658391 Gma06g00603 06 5466232 5468685 ECH
Gma15g00078 15 656600 659548 Gma04g00618 04 5653411 5658391 ECH
Gma04g00618 04 5653411 5658391 Gma06g00603 06 5466232 5468685 GST
Gma17g02011 17 36066057 36068495 Gma04g00618 04 5653411 5658391 PCT
Gma14g01096 14 14679902 14682334 Gma04g00618 04 5653411 5658391 PCT
Gma04g00618 04 5653411 5658391 Gma17g02011 17 36066057 36068495 PCT
Gma04g00618 04 5653411 5658391 Gma14g01096 14 14679902 14682334 PCT