Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00614 ATGGAAGTTGACTTAGTTCTTGCTCTCCCCACTCAAAATTCCGTTGAGGAATTCAAGCTTAACAAGTCGAAACAGATAGTGAGTTTACAGTTATGGAGAGCCAGTTGCGGTTCAGAAAGCGAAAAACGTGTCAAACACAATAAGCGCAGCTTCGAAGAGTCCTTTGGACATTTTTTGAAACCTTTGCCTTTACTAGTTTGGAGTGGACAGCCAAATGAAGAAGATGACCGCAGTGAAAAGGTGCAAAGAAACATTCACATACCAAACAAGAATGGTGATGAAGAAAACCATTTGGTGGGGTGGCCACCAGTTAAATCATGGAGGAGGAAAGAACTCCATCAGCAGCATCCTGCGAGAGGCCGAATTAGGAACGATAGGATTCAAGCTAATGAAAATCAAAGTAGAGGACCAAACTCTTTATATGTCAAGGTTAACATGGAAGGGGTAGCCATAGGAAGGAAAATCAATTTGAGGCTTTTCAATTCTTATCAGACACTCACAAGCAGCTTGATCAGCATGTTTGCTAAATACCAAAAATTTGAGGAAGTTGGAGAAAGTTACACGCTCACCTTTCAAAACGAACAAGGGGAATGGCTGCAAGTAGGACATGTTCCATGGCAATCCTTTATAGGTACTGTGCGGCGTTTAGTGATACTGAGGAATGGAAGTGAAACTATTTGA 681 0.417 MEVDLVLALPTQNSVEEFKLNKSKQIVSLQLWRASCGSESEKRVKHNKRSFEESFGHFLKPLPLLVWSGQPNEEDDRSEKVQRNIHIPNKNGDEENHLVGWPPVKSWRRKELHQQHPARGRIRNDRIQANENQSRGPNSLYVKVNMEGVAIGRKINLRLFNSYQTLTSSLISMFAKYQKFEEVGESYTLTFQNEQGEWLQVGHVPWQSFIGTVRRLVILRNGSETI 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00614 226 Pfam AUX/IAA family 3 177 IPR033389 -
Gma04g00614 226 Pfam AUX/IAA family 184 224 IPR033389 -
Gma04g00614 226 PANTHER AUXIN-RESPONSIVE PROTEIN IAA29 1 222 - -
Gma04g00614 226 SUPERFAMILY CAD & PB1 domains 133 216 - -
Gma04g00614 226 MobiDBLite consensus disorder prediction 112 138 - -
Gma04g00614 226 Gene3D - 140 225 - -
Gma04g00614 226 ProSiteProfiles PB1 domain profile. 139 226 IPR000270 GO:0005515
Gma04g00614 226 MobiDBLite consensus disorder prediction 112 128 - -
Gma04g00614 226 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 222 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00614 Gma-Chr4 5610388 5612293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00614 131 218 B3 DNA Binding Superfamily AT1G59750 32.955 4.25e-09 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gma04g00614 AUX_IAA 1.9e-25 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00614 K14484 - gmx:100802759 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00614 04 5610388 5612293 Gma04g00614 04 5610388 5612293 ECH