Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00610 ATGGCACAAGATATTGCTACTCCACCAGTTCCTTTTGATTTTGAACTCTTGGTTGGTGATCACCTTAGAACTGTCACAGCCTCATCCAACAGCAGCAGGACAGACCCATGGATTGAACCTGAAAGGTTGAAACTCAGACACAGGATTGGTCGGGGACCCTTTGGTGATGTTTGGTTAGCAACTCATCATCAATCAACTGAAGATTATGATGAGTATCATGAAGTTGCTGCCAAGATGTTACCTCCAATCAGAGAGGAACATATGAAGACTGCATTAGAGAAATTTTGTGAATTATATTTTCAGTGCCAAGGAGCGGCTAGGGTGTGCTGGCTACTTGGAATTTCAATTTTAAATGGAAGGATATGCATCATTATGAATTTTTATGAGGGTTCAGTTGGTGACAAGATGGCTAAACTCAGAGAGGGAAGGATTTCATTGCCTGGTGTTCTGAGGTATGGTATCAATCTGGCTAAAGGTATTCTGGAACTTCACTCGAAAGGGATCCTAGTTCTCAACCTTAAACCGTCTAATGTGCTTCTTGATGATACTGATCAAGCAATACTGGGAGATATTGGTATTCCGAATCTTCTGTTTGGTTCCTCATTCCTTAGCTCAGATATGGCCAACAGGCTTGGTACTCCAAACTACATGGCTCCAGAACAATGGCAACCAGAAGTCAGGGGCCCTGTATCCTTTGAAACAGATTCATGGGGATTTGGGTGCACTATTTTGGAAATGTTGACTGGTAATCAACCTTGGTATGGGTGTCCTGTTGGTGAAATATACCAATCGGTTGTTGAAAAGTATGAAAAACCCCTAATTCCTAGTGGCCTTCCTTCTTCAGTTGAAAATATCCTCAGTGGTTGTTTTGAATATGATTTGAGGAATCGCCCTTCAATGGTAGATATTCTGGCTGTCTTTAGAAGCTCACTGAATGCAGTAGCCAATGATGGAGGATGGATATATCTTGGAACTAACAAAACTATGGCAAAATCAAGTAGCACTGGCTACAGTCAGTGGTCCCTCTCAAAGGATCATCTTCAGGTGGGTGATACAGTGCGCTCTAGAAAGCTTTCCAATTCATGCAATCCTCAAAACATGGAGGTCCCAGAAGGAAATGTTGTTGGTTTAGAACGCAATGTAGATCATGGATTTGTTCTAGTGAGGCTCCATGGTGTTCATGACCCTGTAAGGATTCGTGCATCGACTCTTGAACGTGTCACCAATGGTTTGGGAGCTGGGGATTGGGTACGCTTGAAAGAAGAAGATGACAAGCACTCGCCAGTGGGTATTCTTCATTCTATCAATCGTGATGGCAGAGTGACTGTTGGGTTTATTGGTCTGCAAACTCTTTGGAACGGTAACTGTTCAGATCTTGAAATGGCAGAACCTTACTGCGTGGGCCAGTTTATTAGGCTGAAAGCCAATGTTTTGAGTCCTCGATTTGAATGGCCACGTAAAAGGGGAGGTGCCTGGGCTACTGGTAAGATTTCTTGGATCCTACCAAATGGATGTCTAGTTGTCAAGTTTCCAGGCATGTTGAACTTTTGGGATGCACCAAGAACTGTCTTGGCTGATCCCTCCGAGGTTGATGTCGTTAACTTTAAGAATTGTCCGAAGATGATAGAGAAGTATCAACATGTAGAGGATCACCACTGGGCAGTTAGACCTGTTCTGATTGCATTTGGCTTTCTTACTGCTGTGAAACTAGGAATGTCAATTGGAAAGAAACTTGGGAGGAACATGAATGCTAATGCAATGGATAGTGAAAGTCATTATACAGATAACCAGAATGCTAGCCCTACATGGACATCTTCAGTGGCTAACATCTTTTCCAGAGAAGGTGTTAACTTGGCTAATGGTCGCTAG 1869 0.4302 MAQDIATPPVPFDFELLVGDHLRTVTASSNSSRTDPWIEPERLKLRHRIGRGPFGDVWLATHHQSTEDYDEYHEVAAKMLPPIREEHMKTALEKFCELYFQCQGAARVCWLLGISILNGRICIIMNFYEGSVGDKMAKLREGRISLPGVLRYGINLAKGILELHSKGILVLNLKPSNVLLDDTDQAILGDIGIPNLLFGSSFLSSDMANRLGTPNYMAPEQWQPEVRGPVSFETDSWGFGCTILEMLTGNQPWYGCPVGEIYQSVVEKYEKPLIPSGLPSSVENILSGCFEYDLRNRPSMVDILAVFRSSLNAVANDGGWIYLGTNKTMAKSSSTGYSQWSLSKDHLQVGDTVRSRKLSNSCNPQNMEVPEGNVVGLERNVDHGFVLVRLHGVHDPVRIRASTLERVTNGLGAGDWVRLKEEDDKHSPVGILHSINRDGRVTVGFIGLQTLWNGNCSDLEMAEPYCVGQFIRLKANVLSPRFEWPRKRGGAWATGKISWILPNGCLVVKFPGMLNFWDAPRTVLADPSEVDVVNFKNCPKMIEKYQHVEDHHWAVRPVLIAFGFLTAVKLGMSIGKKLGRNMNANAMDSESHYTDNQNASPTWTSSVANIFSREGVNLANGR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00610 622 PANTHER OS06G0639500 PROTEIN 6 619 - -
Gma04g00610 622 PANTHER OS06G0639500 PROTEIN 6 619 - -
Gma04g00610 622 ProSiteProfiles Protein kinase domain profile. 43 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00610 622 Pfam Protein tyrosine and serine/threonine kinase 43 304 IPR001245 GO:0004672|GO:0006468
Gma04g00610 622 SUPERFAMILY Protein kinase-like (PK-like) 40 305 IPR011009 -
Gma04g00610 622 CDD STKc_PknB_like 44 309 - -
Gma04g00610 622 Gene3D Phosphorylase Kinase; domain 1 19 128 - -
Gma04g00610 622 Gene3D Transferase(Phosphotransferase) domain 1 129 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00610 Gma-Chr4 5584056 5588264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00610 34 314 MAP Kinase Kinase Kinase AT2G17700 25.614 2.26e-20 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Gma04g00610 PK_Tyr_Ser-Thr 2.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00610 - - gmx:100780636 1286.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00610 04 5584056 5588264 Gma04g00610 04 5584056 5588264 ECH
Gma04g00610 04 5584056 5588264 Gma06g00595 06 5396387 5399468 ECH
Gma04g00610 04 5584056 5588264 Gma06g00595 06 5396387 5399468 GST
Gma17g02016 17 36122519 36129620 Gma04g00610 04 5584056 5588264 PCT
Gma14g01091 14 14541575 14545981 Gma04g00610 04 5584056 5588264 PCT
Gma04g00610 04 5584056 5588264 Gma17g02016 17 36122519 36129620 PCT
Gma04g00610 04 5584056 5588264 Gma14g01091 14 14541575 14545981 PCT