Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00609 ATGTTCGCCGAAGAGAATGGCCTCAAGGGAGACCCCAGACTCCAAGCCATTTCCCAAGCCATCAGAGTCGTCCCTCACTTCCCCAAACATGGAATAATGTTCCAAGACATAACGACATTGCTGTTGGATCACAAGGCGTTTAAAGACACCGTCGACATTTTTGTCGATCGTTACAGAGACATGCACATTTCCGTAGTTGCTGGAATTGAGGCAAGGGGGTTCATGTTTGGTCCCTCAATTGCGTTGGGCATTGGTGCAAAGTTTGTTCCTTTACGCAAACCACGGAAGCTGCCAGGTGAAGTAATTTCAGAAAAATATGCTCTAGAATATGGAACTGATTGCTTGGAGTTGCATGTTGGTGCTGCCCAGCCCGGTGAACGGGCCATAATAATTGATGACTTGGTGGCCACAGGTGGAACTCTGTCAGCAGGAGTAAAACTTCTAGAACGTGTTGGGGCTGAAGTGGTGGAATGTGCTTGTGTCATTGGTGTGCCTGATGTCAAGGGGCAGTGCAGGAGTATTGGAAAGCCACTTTATGTTCTTGTTGAGCCACGTAAAGCAGATAAATGTCAAGCTCAAGCAGATAAATGTTACTGA 597 0.4707 MFAEENGLKGDPRLQAISQAIRVVPHFPKHGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMHISVVAGIEARGFMFGPSIALGIGAKFVPLRKPRKLPGEVISEKYALEYGTDCLELHVGAAQPGERAIIIDDLVATGGTLSAGVKLLERVGAEVVECACVIGVPDVKGQCRSIGKPLYVLVEPRKADKCQAQADKCY 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00609 198 Pfam Phosphoribosyl transferase domain 43 166 IPR000836 -
Gma04g00609 198 Gene3D - 6 184 IPR029057 -
Gma04g00609 198 CDD PRTases_typeI 51 183 IPR000836 -
Gma04g00609 198 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5-LIKE ISOFORM X1 1 191 - -
Gma04g00609 198 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
Gma04g00609 198 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 1 191 - -
Gma04g00609 198 SUPERFAMILY PRTase-like 20 176 IPR029057 -
Gma04g00609 198 TIGRFAM apt: adenine phosphoribosyltransferase 18 175 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00609 Gma-Chr4 5562620 5566953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00609 11 183 PRT Gene Family AT1G27450 69.364 1.71e-88 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00609 K00759 - gmx:100499904 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00609 04 5562620 5566953 Gma04g00609 04 5562620 5566953 ECH
Gma04g00609 04 5562620 5566953 Gma06g00593 06 5375205 5380231 ECH
Gma04g00609 04 5562620 5566953 Gma06g00593 06 5375205 5380231 GST
Gma17g02019 17 36200047 36202538 Gma04g00609 04 5562620 5566953 PCT
Gma14g01086 14 14295331 14299027 Gma04g00609 04 5562620 5566953 PCT
Gma04g00609 04 5562620 5566953 Gma17g02019 17 36200047 36202538 PCT
Gma04g00609 04 5562620 5566953 Gma14g01086 14 14295331 14299027 PCT