Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00584 ATGGCCAGATCACAACAGCGATACCGAGGTGTCCGACAAAGGCATTGGGGCTCTTGGGTCTCCGAAATTCGACACCCCATATTGAAAACTAGGATATGGCTAGGAACTTTTGAAACTGCTGAGGATGCAGCTAGAGCCTATGATGAAGCAGCAAGGCTAATGTGTGGCACAAGAGCAAGAACTAACTTCCCTTACAACCCCAATGCGTCTCAGTCATCATCTTCCAAGCTTCTCTCAGCAACTTTAACTGCAAAACTGCATAGGTGCTACATGGCTTCTTTGCAAATGACAAGGCCATCATCACAGGCAGAGCCTCAGAGAGTGGCTTCACCAAATGTCATCACCTCCTCCGCGAGCAACTTCTCCATGAAGAGTAACGAAACTGAGACATTGTTGTTGCCACAAAAGAGACAAGAAGAGGAGCAAGAAGCAGAAGGGAATTGGGTTTTCAAGAAGGTTAAGGTGGAAAATGCTCAGCAGTTCAAGCCTCTTGAAGAGGACCACATCGAGCAAATGATAGAGGAGTTGCTGCATTACGGGTCTATTGAGCTATGCTCTGTGATTCCACCACAGGCTCTTTGA 582 0.4708 MARSQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGTRARTNFPYNPNASQSSSSKLLSATLTAKLHRCYMASLQMTRPSSQAEPQRVASPNVITSSASNFSMKSNETETLLLPQKRQEEEQEAEGNWVFKKVKVENAQQFKPLEEDHIEQMIEELLHYGSIELCSVIPPQAL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00584 193 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677
Gma04g00584 193 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Gma04g00584 193 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Gma04g00584 193 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Gma04g00584 193 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Gma04g00584 193 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Gma04g00584 193 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 187 - -
Gma04g00584 193 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Gma04g00584 193 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Gma04g00584 193 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003-LIKE 1 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00584 Gma-Chr4 5309988 5311265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00584 1 193 AP2-EREBP Transcription Factor Family AT5G25190 65.285 1.47e-81 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gma04g00584 AP2 6.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00584 - - gmx:100804510 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00584 04 5309988 5311265 Gma04g00584 04 5309988 5311265 ECH
Gma04g00584 04 5309988 5311265 Gma06g00570 06 5109791 5111114 GST
Gma17g02060 17 37545146 37546190 Gma04g00584 04 5309988 5311265 PCT
Gma14g01049 14 13236951 13238004 Gma04g00584 04 5309988 5311265 PCT
Gma04g00584 04 5309988 5311265 Gma17g02060 17 37545146 37546190 PCT
Gma04g00584 04 5309988 5311265 Gma14g01049 14 13236951 13238004 PCT