Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00569 ATGGCCTCAACCAACCATAATTCTAGTTTCTCTCATTCCTTCTGTCCCTTAATCGCGAAGCAAACCTTAATTTCTTCCATGGGAATGGAACCAACGTGCGTCGACACTTCGCTCAACCTTAACGTTATTCCCTCTCCACACATCGCGGAAGAAGTTTTGGTTGAAGAGTTGCGGCGTTTAAGTAATGAGAACAAGAGATTAACTGAGACGCTGAAACACGTTTGCGAGAACTATGTTGCTTTGCAGAAACATTTAAATGAATTCAGCCAACTGAGGAACGCAAATTTTGATAAAGAAGCAGGAACAGTACCGTCACTGAAGAGAAAGGCCGAGAGTGTGAATCTGTTTGGTATTAACAACTATACTGAGTGCAGCACCATCACTGAGGAAGAAACATTCAAAAGGCCCAAGCATAGCACCGAGCCAAAGGTTTCCAAAGTTCTTACACGAACAGATGCATCTGATACCGGCTTATATGTGAGGGACGGATATCAGTGGAGAAAATATGGTCAAAAAGTCACCAGAGATAACCCTTCTCCTAGGGCTTACTTCAAGTGTTCATATGCCCCAAGCTGCCCAGTGAAGAAGAAGGTGCAAAGAAGTGTAGAAGATCCAAGTGTGTTGGTAACAACTTACGAAGGAGAGCATAACCATGGGCAATAA 663 0.4344 MASTNHNSSFSHSFCPLIAKQTLISSMGMEPTCVDTSLNLNVIPSPHIAEEVLVEELRRLSNENKRLTETLKHVCENYVALQKHLNEFSQLRNANFDKEAGTVPSLKRKAESVNLFGINNYTECSTITEEETFKRPKHSTEPKVSKVLTRTDASDTGLYVRDGYQWRKYGQKVTRDNPSPRAYFKCSYAPSCPVKKKVQRSVEDPSVLVTTYEGEHNHGQ 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00569 220 SUPERFAMILY WRKY DNA-binding domain 159 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma04g00569 220 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 27 219 IPR044810 GO:0003700
Gma04g00569 220 SMART WRKY_cls 160 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma04g00569 220 Pfam WRKY DNA -binding domain 162 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma04g00569 220 ProSiteProfiles WRKY domain profile. 162 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma04g00569 220 Gene3D WRKY domain 144 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma04g00569 220 Coils Coil 50 77 - -
Gma04g00569 220 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 27 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00569 Gma-Chr4 5085846 5087515 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00569 32 218 WRKY Transcription Factor Family AT1G80840 50.754 1.12e-56 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma04g00569 WRKY 2.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00569 - - gmx:100798500 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00569 04 5085846 5087515 Gma06g00555 06 4902892 4904680 GST
Gma17g02121 17 38721498 38725532 Gma04g00569 04 5085846 5087515 PCT
Gma14g00941 14 10682164 10684359 Gma04g00569 04 5085846 5087515 PCT
Gma04g00569 04 5085846 5087515 Gma17g02121 17 38721498 38725532 PCT
Gma04g00569 04 5085846 5087515 Gma14g00941 14 10682164 10684359 PCT