Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00568 ATGGATCAAGAGGTAGAAACGCTTGAAGCGAAGCTGCAACGTGTGAAGGAGGATAATCGCACTCTAAGAGTGATGCTGGAAACTCTGAGCAGCAAATGCGAGAAGCTTCAATCTCATCTTCAAGAAATCAATAATGAGGAACAACAAGTGGGCACGAAGTCAGACCAAAGTGGATCAGTATTATTAGCTAGACCCGAGTTTTCCATGGCACAAAAGCCATCACAAATCTTTTTTAAAACCCACCCCAAGGACAATAGTTTGATGGTAAAAGATGGTTATCAGTGGAAGAAGTATGGACAGAAGAAGGTTACCAAAGACAATCCTTCGCCTAGAGCTTATTTCAAGTGCTCCCTGGCTCCTAGCTGCCCCGTCAAGAAAAGGGTGCAAAGAAGCATACAGGATAAGTCTATCCTTGTTGCAACTTATGAAGGAAAGCACAACCATGGTGTTTTTCACGATTTACTCAAGCCATCATCTTCTATACCCGAAACCTCAATAATGATTAATAATTTACCTATGACAAACATGCCTAACGACAAAGATACGGTGAACATTGACCTGGCTCTATGTAATTGGGATCAAACAGATATAAGACTTTGTGATGAGATGTTAAGCAACAGAACGACCGTGGCAGCAAAAGCAAAATTGAAGGATATGCAAGTCCTCTAG 669 0.4155 MDQEVETLEAKLQRVKEDNRTLRVMLETLSSKCEKLQSHLQEINNEEQQVGTKSDQSGSVLLARPEFSMAQKPSQIFFKTHPKDNSLMVKDGYQWKKYGQKKVTKDNPSPRAYFKCSLAPSCPVKKRVQRSIQDKSILVATYEGKHNHGVFHDLLKPSSSIPETSIMINNLPMTNMPNDKDTVNIDLALCNWDQTDIRLCDEMLSNRTTVAAKAKLKDMQVL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00568 222 Gene3D WRKY domain 74 150 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma04g00568 222 SMART WRKY_cls 89 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma04g00568 222 SUPERFAMILY WRKY DNA-binding domain 86 150 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma04g00568 222 Pfam WRKY DNA -binding domain 90 148 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma04g00568 222 ProSiteProfiles WRKY domain profile. 84 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma04g00568 222 Coils Coil 5 49 - -
Gma04g00568 222 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 2 218 IPR044810 GO:0003700
Gma04g00568 222 PANTHER WRKY TRANSCRIPTION FACTOR 49 2 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00568 Gma-Chr4 5077658 5078716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00568 64 148 WRKY Transcription Factor Family AT1G80840 65.882 5.96e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma04g00568 WRKY 5e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00568 - - gmx:121175041 352.829