Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00562 ATGGCTGGTTCCTCTGCTTCTCTTTTGTTCCTTTTCCTTCTCTTTGGATTCTCAGCAGCTAAGGAGCTATTGGTTGGAGGCAAAATAGATGCTTGGAAGATTCCATCTTCTGAATCAGATACCCTCAATCAATGGGCTGAAAGGTCTCGTTTCAGAGTGGGCGATCATCTAGTGTGGAAATATGAGAGTGGGAAGGACTCAGTGTTGGAAGTAACAAGGGAAGATTATGCTAATTGCAGCACATCCAACCCCATCAAAGAGTACAATGATGGAAACACTAAGGTGAAGCTTGAACATCCTGGTCCATTTTACTTCATCAGTGGATCAAAGGGGCACTGTGAGAAGGGGCAAAAGTTGATTGTGGTGGTAATGTCTCCAAGGCACACATTCACTGCCATTATTTCTCCAGCACCAACACCTTCTCCAGCAGAGTTCGAGGGTCCCGCTGTTGCTCCTACTAGCAGTGCCACAACGTTTCAAGTTGGCCTTCTCACTGCTCTTGGAGTTTTGGctatttatgtgggttttctcatgtaa 537 0.4395 MAGSSASLLFLFLLFGFSAAKELLVGGKIDAWKIPSSESDTLNQWAERSRFRVGDHLVWKYESGKDSVLEVTREDYANCSTSNPIKEYNDGNTKVKLEHPGPFYFISGSKGHCEKGQKLIVVVMSPRHTFTAIISPAPTPSPAEFEGPAVAPTSSATTFQVGLLTALGVLAIYVGFLM 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00562 178 Gene3D - 19 128 IPR008972 -
Gma04g00562 178 SUPERFAMILY Cupredoxins 20 124 IPR008972 -
Gma04g00562 178 Pfam Plastocyanin-like domain 32 117 IPR003245 GO:0009055
Gma04g00562 178 PANTHER EARLY NODULIN-LIKE PROTEIN 3 5 171 - -
Gma04g00562 178 CDD OsENODL1_like 21 124 IPR041846 -
Gma04g00562 178 PANTHER BLUE COPPER PROTEIN 5 171 IPR039391 GO:0009055
Gma04g00562 178 ProSiteProfiles Phytocyanin domain profile. 21 125 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00562 Gma-Chr4 5031941 5033131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00562 7 162 Phytocyanin Superfamily AT2G25060 56.688 4.30e-60 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00562 - - gmx:100305551 341.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00562 04 5031941 5033131 Gma04g00562 04 5031941 5033131 ECH
Gma04g00562 04 5031941 5033131 Gma06g00549 06 4853316 4854392 GST
Gma17g02131 17 38843170 38844343 Gma04g00562 04 5031941 5033131 PCT
Gma14g00933 14 10498634 10500013 Gma04g00562 04 5031941 5033131 PCT
Gma04g00562 04 5031941 5033131 Gma17g02131 17 38843170 38844343 PCT
Gma04g00562 04 5031941 5033131 Gma14g00933 14 10498634 10500013 PCT