Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00558 ATGGGAATATATCTCAGCAGTCCAAAAACTGAAAAGTTTTCTGAAGATGGTGAAAATGACTGTCTTAGATATGGTTTATCGTCCATGCAAGGGTGGCGTGCAACAATGGAAGATGCTCATGCTGCATATACTGATCTGGATGAGTCCACTTCATTTTTTGGTGTCTATGATGGTCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCCAAGTTTCTTCATCAACAGGTGCTCAAAAGTGAGACATACTTAACTGGAGATATAGGAACCTCCCTTCAGAAAGCCTTTTTAAGAATGGATGAAATGATGCGTGGTCAAAAGGGATGGAGGGAATTATCAATATTGGGGGATAAGATAAACAAGTTTACTGGGATGATAGAAGGGTTGATTTGGTCTCCACGAAGCAGTGATGGTAATTGCCAAGTTGATGATTGGGGTCTTGAGGAGGGGCCTCATTCTGATTTTGCTGGACCAACTTCGGGAAGCACTGCCTGTGTTGCCGTTATTAGAAACAACCAACTTGTTGTTGCAAATGCTGGTGATTCGCGTTGTGTGATATCTCGGAAGGGCCAGGCATACAATTTGTCTAGAGACCACAAACCTGATCTTGAGATTGAGAAGGACAGAATCTTAAAAGCTGGTGGTTTTATTCATGCAGGACGAGTTAATGGAAGTTTAAATCTTGCAAGAGCTATTGGTGACATGGAATTTAAACAGAATAAGTTTCTTCCTGCTGAAAAACAAATTGTAACTGCCAATCCAGACATAAACACTGTTGAGCTTTGTGACGAAGATGAATTTGTGGTGTTAGCTTGTGATGGCATATGGGATTGCATGTCAAGTCAACAACTGGTAGATTTTGTTCGTGAACAATTGCACTTGAAAACGAAACTTTCTGCAGTGTGCGAAAGCGTACTTGACCGGTGTTTGGCACCATCAACTGCTGGTGGTGAAGGATGTGACAATATGACCATGATCGTGGTGCAGTTCAAAAGACCTGCTCAGTCCAGTGCACCAGCAGAAGAGCAATCCTCTTCTTCAAACGGACAAGCTGAACCTGAAACAAAACTAGAGAGAAGTGAAAGTTAG 1086 0.4217 MGIYLSSPKTEKFSEDGENDCLRYGLSSMQGWRATMEDAHAAYTDLDESTSFFGVYDGHGGKVVAKFCAKFLHQQVLKSETYLTGDIGTSLQKAFLRMDEMMRGQKGWRELSILGDKINKFTGMIEGLIWSPRSSDGNCQVDDWGLEEGPHSDFAGPTSGSTACVAVIRNNQLVVANAGDSRCVISRKGQAYNLSRDHKPDLEIEKDRILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTANPDINTVELCDEDEFVVLACDGIWDCMSSQQLVDFVREQLHLKTKLSAVCESVLDRCLAPSTAGGEGCDNMTMIVVQFKRPAQSSAPAEEQSSSSNGQAEPETKLERSES 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00558 361 MobiDBLite consensus disorder prediction 335 352 - -
Gma04g00558 361 PANTHER PROTEIN PHOSPHATASE 2C 1 341 IPR015655 GO:0004722|GO:0006470
Gma04g00558 361 SMART PP2C_4 12 327 IPR001932 -
Gma04g00558 361 SUPERFAMILY PP2C-like 3 331 IPR036457 -
Gma04g00558 361 Pfam Protein phosphatase 2C 156 313 IPR001932 -
Gma04g00558 361 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Gma04g00558 361 Gene3D - 1 330 IPR036457 -
Gma04g00558 361 CDD PP2Cc 23 329 IPR001932 -
Gma04g00558 361 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Gma04g00558 361 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 341 - -
Gma04g00558 361 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Gma04g00558 361 SMART PP2C_SIG_2 28 329 IPR001932 -
Gma04g00558 361 MobiDBLite consensus disorder prediction 330 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00558 Gma-Chr4 5018138 5025696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00558 1 341 PP2C-type Phosphatase Gene Family AT2G25070 77.126 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00558 K17499 - gmx:100787778 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00558 04 5018138 5025696 Gma04g00558 04 5018138 5025696 ECH
Gma04g00558 04 5018138 5025696 Gma06g00546 06 4827658 4838100 GST
Gma17g02135 17 38865506 38871460 Gma04g00558 04 5018138 5025696 PCT
Gma14g00928 14 10456505 10462445 Gma04g00558 04 5018138 5025696 PCT
Gma04g00558 04 5018138 5025696 Gma17g02135 17 38865506 38871460 PCT
Gma04g00558 04 5018138 5025696 Gma14g00928 14 10456505 10462445 PCT