Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00550 ATGGTAGCACAAGGAAGTTGGTGGAGGATTTTGCAAATGATCAAGAGCTTTTCTAAAAAAAAAATTGGGATTAGAAATGGCAGCGATGAGAATGATGTACAAGAGGACAATTTGAAATTTGATATTGGGTTTGGCCACATCATAGTTGTTCCTCCATACAAGTTTGAGAAGCTCGAAGGTGTAATCAGAAAAATCTACTGTCAGATTGGCCTTACTATAAGGGAAGATGGCTTTTGGATGCCTGTTAGTCATGTCACTGACAAAACCTTGGGTTATTGCTTTATTGAGTATAATACACCTCAGGTTCTTGAGTGGACTCCAATCACTCCACCTGAAACCAATCCGTATAAACCTGTGGAAAATCTTCAATATTGGATGACTGACCCAAAAGCCCGAGACCAATTTGTGATTCATGCTGGTTCTGATACTGAGAGGGTTGTGCTAAATATTTTTGACGTGAGAACTGGGAAAAAAATGAGAAATTTCAATGGAAGTGCTGATGATTTTGCTACTGGAGGTGTCACAGGAGGAGTTTCATGGCCCATTTTCAGATGGGGTGGAGGAAATGGTGACAAATACTTTGCTAGACTCGTACTTGCAGGGTTGAAAGGCTTAAATGGACAACTTGAATTTTATAATGTGGATGAGCTTGAAACTATGGCCATGGCCGAGCATTTTATGGCGACCAGTGTTGAATGGGATCCTACCGGAAGGCCACCGTCACCACTGAGTCCTGAGAAAGAGGAGGAGATGAGTAAGAACTTGAAGAAGTATAGCAAGAAGTATGAGGCAGAGGACCAAGATGTTTCAATGCTGTTAAGGGAGCAGGATAGAAACAAGAGGAGGATGTTAAAGAAGAATGGAAGAGATTGCATGAACAAGAGAAGCTAA 891 0.413 MVAQGSWWRILQMIKSFSKKKIGIRNGSDENDVQEDNLKFDIGFGHIIVVPPYKFEKLEGVIRKIYCQIGLTIREDGFWMPVSHVTDKTLGYCFIEYNTPQVLEWTPITPPETNPYKPVENLQYWMTDPKARDQFVIHAGSDTERVVLNIFDVRTGKKMRNFNGSADDFATGGVTGGVSWPIFRWGGGNGDKYFARLVLAGLKGLNGQLEFYNVDELETMAMAEHFMATSVEWDPTGRPPSPLSPEKEEEMSKNLKKYSKKYEAEDQDVSMLLREQDRNKRRMLKKNGRDCMNKRS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00550 296 Coils Coil 248 268 - -
Gma04g00550 296 MobiDBLite consensus disorder prediction 243 296 - -
Gma04g00550 296 PANTHER BNACNNG51870D PROTEIN 110 144 - -
Gma04g00550 296 MobiDBLite consensus disorder prediction 231 296 - -
Gma04g00550 296 PANTHER BNACNNG51870D PROTEIN 142 197 - -
Gma04g00550 296 PANTHER BNACNNG51870D PROTEIN 197 238 - -
Gma04g00550 296 PANTHER BNACNNG51870D PROTEIN 18 102 - -
Gma04g00550 296 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 142 197 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Gma04g00550 296 PANTHER BNACNNG51870D PROTEIN 238 287 - -
Gma04g00550 296 Pfam Eukaryotic translation initiation factor eIF2A 197 238 IPR013979 -
Gma04g00550 296 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 110 144 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Gma04g00550 296 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 238 287 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Gma04g00550 296 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 18 102 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Gma04g00550 296 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 197 238 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00550 Gma-Chr4 4952793 4957796 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00550 197 286 Eukaryotic Initiation Factors Gene Family AT5G27640 53.788 1.59e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00550 K03253 - gmx:100779711 145.976
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00550 04 4952793 4957796 Gma04g00550 04 4952793 4957796 ECH