Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00539 ATGACTACTACCCCTGTCGTTCAACGCATTTCAGAATGCTTCGTCAAACCACATGGTTTAACCCAAGTGTCAAACCAAATATGTCATTTAACACAATGGGATATTGTTATGTTGTCTAAGCACTATATCCAGAAGGGTCTACTCTTCAAGAAACCCACACCTCTTGTTGATCAACATGATTTCATAGAGAATCTCTTGGAGAAGCTCAAACACTCTCTTTCTCTCACTCTCTCCCATTTTTATCCTTTGGCTGGTCGCCTTGTCACCCAAAAATCCCAAGACCCTCCTTCTTATGCTGTTTCTGTTGATTCCAAAAACAGTGATGGAGCCAGATTCATCTATGCAACTCTGGATATGACCATATCTGACATCCTCTCTCCCGTTGACGTCCCACTCGTTGTTCAGTCATTGTTTGACCACCACAAAGCAGTCAACCATGATGGTCACACCATGCCCCTTTTGTCCATCCAAGTCACCGAAATAGTTGATGGTGTTTTCTTAGGTTGTTCCATGAATCACGCTGTCGGTGATGGCACCTCTTATTGGAATTTCTTCAATACATGGTCTCAGATCTTTCAAGCTCATGCTAAAGGGCACGACACTGATGTTCCCATTTCACACCAACCTATTCTCAGCCGCTGGTTTCCGAATGATTGTGCTCCACCAATAAATCTTCCTTTCAAACATCATGACGAGTTTATCAGCAGAATTGAAGCACCCTTGATGAGGGAGAGAGTCTTCCACTTCTCAGCAGAGTCTATTGCAAGACTGAAAGCAAAGGCCAACATGGAATCCGATACCACAAAAATCTCTTCATTCCAGTCACTATCAGCACTTGTTTGGAGATGCATAACTCGTGCATGTTCCCTACCTTATGAGCAAAGAACAAGTTGCAGGTTAACCGCAAACAATCGAACAAGAATGGAACCACCTTTGCCTCAGCAATACTTTGGAAACTCAGTAAGTAGGTTGAATGCACAAACAACAGTAGGGGAATTACTTGAGAACAATCTAGGATGGGCTGCATGGAAGTTGCACCTGGCTGTTACAAACCATAACGACAAAGTGGTTCTGCAATCACTCAAAAAGTGGTTACAGTGTCCTTTAATCTATCAAATTGGTCAGCCCATGGATCCGTACGATGTGTTGATAAGTAGCTCACCCAGGTTCAACATGTATGGAAATGAGTTTGGAATGGGGAAAGCTGTAGCAGTGAGAAGTGGTTATGCCAACAAATTTCATGGGAAAGTGACATCATACCCAGGTCGTGAAGGAGGGGGAAGCATCGATTTGGAAGTGGGCCTTTTGCCACATATAATGAGCGCTCTGGAATCTGATGAGGAGTTTATGAAGGTTGTTTCGGTTTCCAATCCCTTATGCTAG 1383 0.4346 MTTTPVVQRISECFVKPHGLTQVSNQICHLTQWDIVMLSKHYIQKGLLFKKPTPLVDQHDFIENLLEKLKHSLSLTLSHFYPLAGRLVTQKSQDPPSYAVSVDSKNSDGARFIYATLDMTISDILSPVDVPLVVQSLFDHHKAVNHDGHTMPLLSIQVTEIVDGVFLGCSMNHAVGDGTSYWNFFNTWSQIFQAHAKGHDTDVPISHQPILSRWFPNDCAPPINLPFKHHDEFISRIEAPLMRERVFHFSAESIARLKAKANMESDTTKISSFQSLSALVWRCITRACSLPYEQRTSCRLTANNRTRMEPPLPQQYFGNSVSRLNAQTTVGELLENNLGWAAWKLHLAVTNHNDKVVLQSLKKWLQCPLIYQIGQPMDPYDVLISSSPRFNMYGNEFGMGKAVAVRSGYANKFHGKVTSYPGREGGGSIDLEVGLLPHIMSALESDEEFMKVVSVSNPLC 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00539 460 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 453 - -
Gma04g00539 460 Pfam Transferase family 12 450 - -
Gma04g00539 460 Gene3D - 235 445 IPR023213 -
Gma04g00539 460 Gene3D - 9 223 IPR023213 -
Gma04g00539 460 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00539 Gma-Chr4 4841110 4843140 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00539 69 444 Monolignol Biosynthesis Gene Families AT5G48930 27.778 6.80e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00539 - - gmx:100810046 931.013