Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00526 ATGAGTTCTAAAAAGATTACATGGAAGTCGATAGTGTTGATCTTAAGTTGTTACAAGACTCAATGTCACTTGCAGGATTCAGAGAAACAGGTTTTAAAACAAGGTTCATTCCAAAGGTTATGCCTCTCGGATATAAGCATTCCTAGCTCCCCTCAGGCCATTGAAGATCTTTCCATTTCCATTTCCCTGGTTGGCCCAAAGTTGTACACATTCCCACTAGATGAGCTGAGGGAAGCAACACACAATTTCTCATGGAATAATTTTCTCGGTGAAGGCGGGTTTGGACCCGTGTACAAGGGTTTCGTTGATGACAAACTTAGACTTGGTTTGAAGGCTCAGCCTGTGGCTGTGAAACAACTGGACTTGGATGGCTTGCAAGGTCACAGGGAGTGGCTGGCAGAAATTATATTTCTTGGACAGCTGAGACATCCGCATCTTGTTAAGTTAATTGGGTACTGCTGTGAGGATGAGGACAGGCTTCTGGTGTATGAATACATGGCAAGAGGCAGCTTGGAGAATCAACTGCACAGAAGATACTCTGCTGCCTTACCATGGTCAACAAGGATGAAGATTGCATTGGGTGCAGCCAGGGGTCTGGCCTTCCTTCATGAAGCAGATAAACCTGTAATATACAGAGATTTCAAAACTTCAAATATCCTACTAGACTCGGATTACATAGCTAAACTATCAGACCTTGGGCTAGCAAAGGATGGTCCTGAAGGGGAAGACACACATGTAACAACAACATGCATAATGGGAACCCGAGGCTATGCTGCTCCTGAGTACATCATGTCAGGTCACCTTTCCACCAagagtgatgtgtatagctatggagtggttttgttggaattgcttacaggaagaagggtagtggATATGTGCCGGCCGAATCGAGAACGAAGCCTGGTGGAATGGGCAAGGCCTCTTTTGAGAGATCAAAGAAAGCTGTACCATATAATAGACCCAAGATTGGAAGGGCAGTTTCCTATGAAAGGAGCTTTGAAGGTTGCTGCATTGACTTACAAATGCTTGAGCCACCACCCCAATCCAAGGCCTTCTATGAGTGATGTTGTAAAAATATTAGAATCACTTCAGGACTTGGATGATGTGATCATAGGACCATTTGTATATGTCGCGGGGTGA 1143 0.4217 MSSKKITWKSIVLILSCYKTQCHLQDSEKQVLKQGSFQRLCLSDISIPSSPQAIEDLSISISLVGPKLYTFPLDELREATHNFSWNNFLGEGGFGPVYKGFVDDKLRLGLKAQPVAVKQLDLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCCEDEDRLLVYEYMARGSLENQLHRRYSAALPWSTRMKIALGAARGLAFLHEADKPVIYRDFKTSNILLDSDYIAKLSDLGLAKDGPEGEDTHVTTTCIMGTRGYAAPEYIMSGHLSTKSDVYSYGVVLLELLTGRRVVDMCRPNRERSLVEWARPLLRDQRKLYHIIDPRLEGQFPMKGALKVAALTYKCLSHHPNPRPSMSDVVKILESLQDLDDVIIGPFVYVAG 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00526 380 Pfam Protein tyrosine and serine/threonine kinase 86 361 IPR001245 GO:0004672|GO:0006468
Gma04g00526 380 SUPERFAMILY Protein kinase-like (PK-like) 64 363 IPR011009 -
Gma04g00526 380 Gene3D Transferase(Phosphotransferase) domain 1 166 371 - -
Gma04g00526 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Gma04g00526 380 PANTHER OS01G0588500 PROTEIN-RELATED 21 379 - -
Gma04g00526 380 Gene3D Phosphorylase Kinase; domain 1 49 165 - -
Gma04g00526 380 CDD STKc_IRAK 89 364 - -
Gma04g00526 380 ProSiteProfiles Protein kinase domain profile. 83 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00526 380 PANTHER KINASE 1B 21 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00526 Gma-Chr4 4692713 4695673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00526 48 361 Glycoside Hydrolase AT3G07070 49.231 8.10e-99 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma04g00526 PK_Tyr_Ser-Thr 2.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00526 - - gmx:100805771 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00526 04 4692713 4695673 Gma04g00526 04 4692713 4695673 ECH
Gma04g00526 04 4692713 4695673 Gma06g00516 06 4399927 4402906 ECH
Gma09g00640 09 7260471 7264012 Gma04g00526 04 4692713 4695673 ECH
Gma07g00373 07 3334683 3336610 Gma04g00526 04 4692713 4695673 ECH
Gma04g00526 04 4692713 4695673 Gma06g00516 06 4399927 4402906 GST