Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00521 ATGCCAGAACCAACCATGAGTCTGCGCCACGGCACCAAGGTTTGGGTCCACGATAGAGATTCCGCTTGGATTCCCGCTGAAGTGCTCGAGTCTTCGGGAAAGAAAGTTACCGTTGCCACCGCTTCCGGCAAGAAGGTTGTTTTTCTTCCGGAGAACGTGTTTCCCAGGGATGCTGATGAAGAAGAGCACGGCGGAGTCGAAGATATGACGAGGTTGGCTTACTTGAATGAGCCAGGGGTGTTGTACAATCTCCAGAGAAGATATGCACTGAACGATATTTATACATATACAGGGAGCATTTTAATAGCTGTTAATCCATTCACAAAGCTTCCTCATTTGTATGATATCCATATGATGGAGCAGTATAAGGGAGCTCTGTTTGGTGAGCTTAGTCCACATGTATTTGCTGTTGCCGATGCATCTTATAGAGCAATGATGAATGGAGGTCAAAGCCAATCTATCTTGGTCAGCGGTGAAAGTGGTGCTGGGAAAACTGAGACAACAAAATTGATTATGCAATATCTTACGTATGTTGGTGGGCGTGCTGCTGGTGATGATAGAACAGTTGAACAACAAGTTCTTGAATCAAATCCACTTTTAGAGGCATTTGGAAACGCAAGGACTGTCAGGAATGACAATTCAAGCCGATTTGGGAAGTTTGTTGAAATTCAGTTTGATTCAAATGGTAGAATATCTGGTGCTGCAATTAGAACTTACTTACTAGAAAGATCACGAGTAGTGCAGATAACAGATCCAGAAAGAAATTATCACTGCTTTTATCAATTGTGTGCATCTGAAAGGGATGTAGAAAAGTATAAGTTGGGAAAGCCAAGCCACTTCCACTATTTGAATCAAAGTAAAGTCTATGAATTAGATGGCGTAAGCAGTGCTGAAGAGTACATGAAGACGAGGAGAGCAATGGATATTGTTGGCATAAGTCTAGGGGATCAGGAAGCCATATTTTGCACCTTAGCTGCAATTTTACATTTGGGAAACATTGAATTTTCTCCTGGAAAAGAGCATGACTCGTGTGATTTGAACCTACTGCTAGCAACACTATGCACCCGTTCAATACAAACCCGAGAAGGAAATATCATCAAAGCTCTTGACTGTAATGCTGCTGTCGCTGGTCGGGATGCTTTGGCAAAAACTGTCTATGCTCGTTTATTTGATTGGCTTGTTGATAAGATCAATAGTTCTGTCGGGCAAGATATCAGTTCCCAGAAGCAAATTGGAGTTTTGGATATATATGGTTTTGAGTGTTTTAAGGATAATAGTTTTGAGCAATTCTGCATCAATTTTGCAAATGAAAAGCTCCAGCAACATTTTAATCAGCATGTTTTCAAGATGGAGCAGGAAGAATACAGCAAAGAAGAAATCAACTGGAGTTACATTGAGTTTATAGACAACCAAGATGTTTTAGATTTGATTGAAAAGAAACCCATTGGTATTATTGCTTTGTTAGATGAAGCTTGCATGTTTCCAAAATCAACGCACGAAACATTCTCAACCAAGTTGTTTAAGCACTTCCTGTCACACCCTAGGTTAGAAAAGGAGAAGTTTTCTGAAACAGATTTTACCCTTTCTCATTATGCTGGAAAGGTCACTTACCATACAAACACCTTCTTAGACAAAAATCGTGATTATGTAGTCGTAGAACATTGTAATCTATTATCCTCTTCAAAATGCCCCTTTGTGTCGGCTCTTTTTCCTTTGCTATCAGAGGAATCTTCAAGGTCATCATACAAGTTTTCTTCTGTGGCTTCCAGATTTAAGCAACAACTTCAATCACTCATGGAAACACTTAACACAACAGAGCCTCATTACATTCGATGTGTCAAGCCGAATTCTTTGAATCGACCACAAAAGTTTGAGAATACTAGTGTCATACACCAATTACGCTGTGGGGGTGTCCTTGAGGCTGTTAGAATAAGTCTGGCAGGTTACCCCACTCGAAGGATTTACTCAGAGTTTGTAGATCGCTTTGGATTAATAGCTCCCGAATTTATGGATGGAAGTTATGATGACAAAGATGTAACTCTGAAAATATTGCAAAAGCTAAAGCTTGAGAATTTTCAGTTAGGTAGGACCAAGGTATTTCTCAGGGCTGGTCAAATTTGCATTTTAGACTCTAGACGTGCAGAAGTTTTGGACAATGCTGCAAAGTGTATTCAGCGTCGACTGCGGACATTTATTGCACGCCGGGATTTCATCTCAATCCAAGCTGCTGCTCTTTCTCTTCAAGCATGCTGCAGGGGATTCATTGGCCGAAAGTTATATGCTTCTAAACGGGAAACATCAGCAGCTATCTCCATTCAGAAATATATCCGTATGTGTTGGATGAGGCATGCTTATGTGAAATTATATTATTCAGCTATTATTGTACAGTCCAATGTTCGTGGTTTCACAACTCGTCAAAGGTTCTTGCATAGAAAAGAACACAAAGCTGCCACTTCTATTCAGGCCTATTGGAGGATGTGCAAGGTTCGGTCTGCCTTCCTAAAACATCAAAATTCAATTGTAGTTATACAATGCCTTTGGCGGTGTAAACAAGCAAAAAGAGAGCTTCGCAAACTTAAACATGAGGCTAATGAAGCTGGAGCCTTGCGTTTAGCTAAGAATAAACTTGAGAAACAATTGGAAGAGCTTACATGGCGTTTGCATCTTGAGAAAAAAATAAGGGTTTCTAATGAAGAGGCTAAGCATGTTGAGATTTCCAAGCTACAGAAGATGGTAGATGCTCTGAATCTTGAATTAGATGCAGCTAAACTAGCAACAATTAATGAGTGCGACAAAAATGCGGTTTTGCAAAATCAGTTGCAATTGTTAGTAAAGGAAAAATCTGCTTTAGAAAGAGAGCTAGTTGCAATGGATGAAGTGCGAAAGGAAAATGCTCTATTAAAGGGTTCATTGGATGCTTTTGAAAAGAAGAGCACCGCTTTGGAGCTCGAGCTTGTGAATGCTCGGAAAGACCATGATAAAACCATTCAGAAAATGAGGGAGTTTGAAGATAAGTGTTCTGAACTTGGGCAAAATGTCAAAAGTCTTGAGGAAAAGCTCTCAATTTTAGAGGATGAAAATCACGTGCTTCGGCAGAAAGCCTTAAGTGTCTCTCCTAAGAGTAACCATCGAGGTTTGACAAAGTCATTATCTGAAAAATACTCAAGCGCAATAGCCCCCTGCACCGAGCAGAAGCCCACATTTGAATCGCCCGCACCTACAAAACTTATTTCCCATATTACACATGGCGGCTTGTCAGACTCTCGTCGATCAAAATTAACAGCAGAGAAGCACCAGGATAACTATGAACTCCTCTCTAGGTGCATCAAAGAGGATTTGGGGTTCAAAAATGGTAAACCTCTGGCAGCTAGTATCATATACAAATGTCTTCATCATTGGCATGCATTTGAATCTGAGCGCACAGCCATATTTGATTACATAGTTGATGGAATTAATGATGTTCTTAAGGTTAGAGACAATGACATTGTCTTGCCATATTGGCTGTCCAATACATCTGCACTTCTATGCCTCTTGCAAAGGAACTTGCATCCAAATGGTTTTTTAACAACCACTGCTCAACGTTATGCCAGATCATCTGGCTTGACCAGCCGAATAGGGAATGGACTGAGGTCTCCATTGAAGCTTATTGTATATGATGATAATACATCACAGGTGGAGGCAAGATATCCAGCTATTCTTTTTAAACAACAACTAACTGCTTGCGTAGAGAAGATTTTTGGCCTTATACGTGATAATTTGAAAAAGGAGCTGTCTCCACTTCTGGGATCATGTATTCAGGCACCTAAGGCTAAAATGGGTCGAGTGCAAGGTGGAAAATCATCTAGATCTCCTGGTGGGCTTCCTCAACAATCACCTGTTGCTCAATGGGACAACATCATCAATTTTTTGGATTCTCTCATGAGCCGCTTATGTGCAAATCATGTACCATCCTTCTTCATCCGCAAGCTAGTTACTCAGGTTTTTTCCTTCATCAATATTACACTCTTCAACAGCCTTCTGTTGCGGCGTGAATGTTGTACTTTCTCAAATGGTGAATATGTTAAGTCTGGTCTCGCAGAACTTGAGAAATGGATAGCAAATGCAAAAGAGGAGTATGCAGGAACGTCCTGGCATGGGCTGAATTATATAAGACAAGCTGTTGGGTTTCTGGTAATACATCAGAAGAGGAAAAAATCTTTGGAAGAAATTCGGCAGGATCTTTGTCCGGCATTGACTGTGAGGCAAATTTATCGAATCAGTACTATGTACTGGGACGACAAGTATGGAACCCAGAGTGTGTCCAATGAGGCAATTAGTGAAATGAGGGAAATTGTGAGCAAGGACAATCAGTGTTTGAGCTCTAATTCATTCTTGTTGGATGATGATATGAGCATTCCTTTTTCTGCTGAAGACATAGATAAGGCAATCCCTGCTATAAATACTcacaacctagtCGGAAATGTTTCCATTCAAGTGGACGGCAATCTTAGTTGTCATCAGGTTTACTGGTCTCAGTCACCAAATGCTTTTGGTATGAGATTGTAA 4545 0.4046 MPEPTMSLRHGTKVWVHDRDSAWIPAEVLESSGKKVTVATASGKKVVFLPENVFPRDADEEEHGGVEDMTRLAYLNEPGVLYNLQRRYALNDIYTYTGSILIAVNPFTKLPHLYDIHMMEQYKGALFGELSPHVFAVADASYRAMMNGGQSQSILVSGESGAGKTETTKLIMQYLTYVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASERDVEKYKLGKPSHFHYLNQSKVYELDGVSSAEEYMKTRRAMDIVGISLGDQEAIFCTLAAILHLGNIEFSPGKEHDSCDLNLLLATLCTRSIQTREGNIIKALDCNAAVAGRDALAKTVYARLFDWLVDKINSSVGQDISSQKQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNQHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTHETFSTKLFKHFLSHPRLEKEKFSETDFTLSHYAGKVTYHTNTFLDKNRDYVVVEHCNLLSSSKCPFVSALFPLLSEESSRSSYKFSSVASRFKQQLQSLMETLNTTEPHYIRCVKPNSLNRPQKFENTSVIHQLRCGGVLEAVRISLAGYPTRRIYSEFVDRFGLIAPEFMDGSYDDKDVTLKILQKLKLENFQLGRTKVFLRAGQICILDSRRAEVLDNAAKCIQRRLRTFIARRDFISIQAAALSLQACCRGFIGRKLYASKRETSAAISIQKYIRMCWMRHAYVKLYYSAIIVQSNVRGFTTRQRFLHRKEHKAATSIQAYWRMCKVRSAFLKHQNSIVVIQCLWRCKQAKRELRKLKHEANEAGALRLAKNKLEKQLEELTWRLHLEKKIRVSNEEAKHVEISKLQKMVDALNLELDAAKLATINECDKNAVLQNQLQLLVKEKSALERELVAMDEVRKENALLKGSLDAFEKKSTALELELVNARKDHDKTIQKMREFEDKCSELGQNVKSLEEKLSILEDENHVLRQKALSVSPKSNHRGLTKSLSEKYSSAIAPCTEQKPTFESPAPTKLISHITHGGLSDSRRSKLTAEKHQDNYELLSRCIKEDLGFKNGKPLAASIIYKCLHHWHAFESERTAIFDYIVDGINDVLKVRDNDIVLPYWLSNTSALLCLLQRNLHPNGFLTTTAQRYARSSGLTSRIGNGLRSPLKLIVYDDNTSQVEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLGSCIQAPKAKMGRVQGGKSSRSPGGLPQQSPVAQWDNIINFLDSLMSRLCANHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIANAKEEYAGTSWHGLNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEAISEMREIVSKDNQCLSSNSFLLDDDMSIPFSAEDIDKAIPAINTHNLVGNVSIQVDGNLSCHQVYWSQSPNAFGMRL 1514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00521 1514 Gene3D - 815 864 - -
Gma04g00521 1514 Gene3D - 716 766 - -
Gma04g00521 1514 Gene3D - 767 814 - -
Gma04g00521 1514 Pfam DIL domain 1323 1426 IPR002710 -
Gma04g00521 1514 Gene3D - 12 56 IPR008989 GO:0003774|GO:0005524|GO:0051015
Gma04g00521 1514 Pfam Myosin head (motor domain) 66 702 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma04g00521 1514 Coils Coil 849 893 - -
Gma04g00521 1514 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 9 58 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gma04g00521 1514 Coils Coil 933 1033 - -
Gma04g00521 1514 ProSiteProfiles IQ motif profile. 813 840 IPR000048 GO:0005515
Gma04g00521 1514 Gene3D - 254 308 - -
Gma04g00521 1514 CDD MYSc_Myo11 78 702 IPR036018 -
Gma04g00521 1514 PANTHER PROTEIN OPAQUE1-LIKE 8 1488 - -
Gma04g00521 1514 SMART DIL_2 1322 1429 IPR002710 -
Gma04g00521 1514 Gene3D Kinesin motor domain 64 648 IPR036961 -
Gma04g00521 1514 ProSiteProfiles IQ motif profile. 788 817 IPR000048 GO:0005515
Gma04g00521 1514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 765 863 IPR027417 -
Gma04g00521 1514 Pfam Myosin N-terminal SH3-like domain 11 48 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gma04g00521 1514 ProSiteProfiles IQ motif profile. 836 865 IPR000048 GO:0005515
Gma04g00521 1514 ProSiteProfiles Dilute domain profile. 1145 1447 IPR002710 -
Gma04g00521 1514 ProSiteProfiles Myosin motor domain profile. 64 714 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma04g00521 1514 Gene3D - 422 605 - -
Gma04g00521 1514 PRINTS Myosin heavy chain signature 94 113 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma04g00521 1514 PRINTS Myosin heavy chain signature 410 438 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma04g00521 1514 PRINTS Myosin heavy chain signature 151 176 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma04g00521 1514 PRINTS Myosin heavy chain signature 198 225 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma04g00521 1514 PRINTS Myosin heavy chain signature 463 491 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma04g00521 1514 ProSiteProfiles IQ motif profile. 740 769 IPR000048 GO:0005515
Gma04g00521 1514 Gene3D - 649 715 - -
Gma04g00521 1514 CDD MyosinXI_CBD 1096 1470 IPR037975 GO:0007015
Gma04g00521 1514 Pfam IQ calmodulin-binding motif 766 785 IPR000048 GO:0005515
Gma04g00521 1514 Pfam IQ calmodulin-binding motif 791 808 IPR000048 GO:0005515
Gma04g00521 1514 Pfam IQ calmodulin-binding motif 838 857 IPR000048 GO:0005515
Gma04g00521 1514 Pfam IQ calmodulin-binding motif 742 760 IPR000048 GO:0005515
Gma04g00521 1514 Pfam IQ calmodulin-binding motif 814 833 IPR000048 GO:0005515
Gma04g00521 1514 Pfam IQ calmodulin-binding motif 719 737 IPR000048 GO:0005515
Gma04g00521 1514 PANTHER MYOSIN 8 1488 - -
Gma04g00521 1514 Gene3D Myosin VI head, motor domain, U50 subdomain 309 400 - -
Gma04g00521 1514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 761 IPR027417 -
Gma04g00521 1514 SMART iq_5 716 738 IPR000048 GO:0005515
Gma04g00521 1514 SMART iq_5 787 809 IPR000048 GO:0005515
Gma04g00521 1514 SMART iq_5 835 857 IPR000048 GO:0005515
Gma04g00521 1514 SMART iq_5 764 786 IPR000048 GO:0005515
Gma04g00521 1514 SMART iq_5 812 834 IPR000048 GO:0005515
Gma04g00521 1514 SMART iq_5 739 761 IPR000048 GO:0005515
Gma04g00521 1514 SMART MYSc_2a 58 715 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma04g00521 1514 Coils Coil 905 925 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00521 Gma-Chr4 4637788 4659822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00521 6 1480 Myosins gene family AT4G33200 72.193 0.0 2169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00521 K10357 - gmx:100804699 2908.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00521 04 4637788 4659822 Gma04g00521 04 4637788 4659822 ECH
Gma04g00521 04 4637788 4659822 Gma06g00509 06 4337387 4357840 GST
Gma04g00521 04 4637788 4659822 Gma14g00890 14 9728282 9759087 PCT