Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00506 ATGGATAATAATAACAACAACAACATCAACTCCTCCGTGTTTGTTTCATACGCATGTCGAGATCCATTTGTCAGTCCACTTCTCGATAACTTTAACGAACCGGATCCTGCACTTGTCTATTTATTACCCGAACCGAACCTACGAAATGATGAACAGCAGCCCCTGCAGGGTCATGTTTCCTCCACGGATTCAACGATCCATGATCAATCCCACCATTATTGCAATGACAATTTTACCATCGGAGGAGGAGTATTTCCTAACTATGAATTCGTAGAGGGGTCTTCCAAGAACAAGCGTAAATATCCCTTCACGGATACGGATATTGAAGATCAATCCTTCATGCATGACTTTGAAGCGGGTCCATCCAATCTGAATCAGCCAGCAAGTGGGAATATGGGTCCTCGTAATTGGCCTCCTATGCCAAGGCCATTCTTTTGCACTTGCTGCCAAGTTCTAAGACAGACAATTCACACCAATGGTACTGATTTTGAGAGACTAGAAATACATGGAAGGATCGGATTGATCAGCCACATAATAATTCAGAATCAGAGTATTACACCGGGTGGTAGATCATGTGACAATTATCAAATGATTGATTTCACCAACGGAAGCCCTGCAGAAGTTAAGGGTTTCCTTGAAGATTACATTGCACGGAAGGATAAATTAGGGTACATTATTGCGGAAGAATCTTTTTCTGAGTTTTATGAAGCCGTCTGCACAAAACTTGATTGGGTTGGAAAACGCACTAATAACGAAGACGATGATTTGACTCCACAAAATGTGGAGGAAGAACCTGAGCCTGAGCCTGAGCCGCCTAAGGAAAGAAGGCGTAAACGTAGTCGCAAAGACCAGTCAGATAGGATAAATAGTATGACATTGGATGATTTGAGTGGCGTGTTCCACATAACTATGAAGGCTGCAAAGAATGTATTAGACATGTCTGTTACTGCAATTAAGTCAATTTGCCGCAAGTGTCGTTTATATAAATGGCCCCACAGACAGTTGCAACCCCTAGCGAGGAGGTTGAAAGTGCTGAAAAGAGCATTGGAATCTTCACAAGATCCAGTGGTAATACAAACAACTAGCATGGAAGTTCGAAGAATTAAACAACACATGACTCAGTTGTGTGGTGGAGTTACCCCAACGGGTATAGAAATTCCTGAAGTTGAAGAATAG 1176 0.4226 MDNNNNNNINSSVFVSYACRDPFVSPLLDNFNEPDPALVYLLPEPNLRNDEQQPLQGHVSSTDSTIHDQSHHYCNDNFTIGGGVFPNYEFVEGSSKNKRKYPFTDTDIEDQSFMHDFEAGPSNLNQPASGNMGPRNWPPMPRPFFCTCCQVLRQTIHTNGTDFERLEIHGRIGLISHIIIQNQSITPGGRSCDNYQMIDFTNGSPAEVKGFLEDYIARKDKLGYIIAEESFSEFYEAVCTKLDWVGKRTNNEDDDLTPQNVEEEPEPEPEPPKERRRKRSRKDQSDRINSMTLDDLSGVFHITMKAAKNVLDMSVTAIKSICRKCRLYKWPHRQLQPLARRLKVLKRALESSQDPVVIQTTSMEVRRIKQHMTQLCGGVTPTGIEIPEVEE 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00506 391 Pfam RWP-RK domain 290 336 IPR003035 -
Gma04g00506 391 PANTHER RWP-RK DOMAIN PROTEIN 31 377 - -
Gma04g00506 391 ProSiteProfiles RWP-RK domain profile. 270 358 IPR003035 -
Gma04g00506 391 PANTHER PROTEIN RKD4 31 377 IPR044607 GO:0003700
Gma04g00506 391 MobiDBLite consensus disorder prediction 266 288 - -
Gma04g00506 391 MobiDBLite consensus disorder prediction 250 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00506 Gma-Chr4 4504450 4506507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00506 250 353 NLP Transcription Factor Family AT1G64530 30.769 7.45e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Gma04g00506 RWP-RK 6.9e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00506 - - gmx:102665948 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00506 04 4504450 4506507 Gma06g00494 06 4215112 4217128 GST