Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00504 ATGAGTTTGGGAACCGCGGAGGAGGAATCGGGTTCCGAAATCCACATCCCGGCGGAAATCGACTGGCACATGCTGGACAAGTCAAAATTCTTCTTCCTGGGTGCGGCCTTATTCTCCGGCGTCTCATGCGCACTCTATCCCATGGTGGTGTTGAAGACGCGGCAACAAGTTTCCTCCTCACGTTTCTCCTGCCTCAACATCTCCTGCGCCATTCTCCGCCACGAGGGATTCCGCGGCTTCTACAAGGGCTTCCCCACCTCCCTCATGGGCACCATCCCCGCGCGTGCCCTCTACATGGCCTCCCTCGAGTTCACCAAGACCAACGTTGGCACCGCTTTCGTCCAATTCGGCTTCTCCGAAACCTCCGCCGTTGCGGCTGCCAACGCCGCCGCGGGCGTCACCTCCGCCATGGCGGCGCAGCTCGTGTGGACCCCCATCGACGTCGTGAGTCAGCGGCTCATGGTTCAGGGGAGTGGTGGGAGCAAAACCGTGCTCGCCAATCTCAATTCTGAAAATTACAGAAACGGGTTTGATGCTTTTAGGAAAATTCTGTGTGCCGATGGAGCGAGAGGGTTTTATAGAGGGTTTGGGATTTCTATATTGACTTATGCGCCTTCAAATGCTGTTTGGTGGACTTCTTATTCTATGGTTCATAGACTCATTTGGGGTGCTTTTGGTTCTTACTTGGGGAATAATAATTTGGGGGGAGGGTTTAGGCCTGATTCGAAGGCAATGGTGGCGGTTCAAGGGTTGAGTGCGGTTATGGCAAGTGGGGTATCTGCAATTGTGACAATGCCGCTTGATACCATTAAAACGAGGTTGCAGGTGTTGGATCTTGAAGAGAATGGGAGAAGAAGGCCTTTGACTTTTGTTCAGACGGTGAGGAATTTGGTGAAGGAAGGTGGTTTGGTTGCTTGTTACAGAGGATTGGGTCCCAGATGGGCTTCCATGTCCATGTCTGCCACAACTATGATTACTACATATGAATTTTTGAAACGAATGTCTACCAAGAGTCAAGAGGATTTCACTTCATCATAG 1038 0.5183 MSLGTAEEESGSEIHIPAEIDWHMLDKSKFFFLGAALFSGVSCALYPMVVLKTRQQVSSSRFSCLNISCAILRHEGFRGFYKGFPTSLMGTIPARALYMASLEFTKTNVGTAFVQFGFSETSAVAAANAAAGVTSAMAAQLVWTPIDVVSQRLMVQGSGGSKTVLANLNSENYRNGFDAFRKILCADGARGFYRGFGISILTYAPSNAVWWTSYSMVHRLIWGAFGSYLGNNNLGGGFRPDSKAMVAVQGLSAVMASGVSAIVTMPLDTIKTRLQVLDLEENGRRRPLTFVQTVRNLVKEGGLVACYRGLGPRWASMSMSATTMITTYEFLKRMSTKSQEDFTSS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00504 345 Pfam Mitochondrial carrier protein 36 109 IPR018108 -
Gma04g00504 345 Pfam Mitochondrial carrier protein 126 222 IPR018108 -
Gma04g00504 345 Pfam Mitochondrial carrier protein 247 338 IPR018108 -
Gma04g00504 345 Gene3D Mitochondrial carrier domain 28 344 IPR023395 -
Gma04g00504 345 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 341 - -
Gma04g00504 345 PRINTS Mitochondrial carrier protein signature 40 58 IPR002067 GO:0055085
Gma04g00504 345 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085
Gma04g00504 345 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085
Gma04g00504 345 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Gma04g00504 345 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 341 - -
Gma04g00504 345 ProSiteProfiles Solute carrier (Solcar) repeat profile. 244 334 IPR018108 -
Gma04g00504 345 SUPERFAMILY Mitochondrial carrier 23 331 IPR023395 -
Gma04g00504 345 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 220 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00504 Gma-Chr4 4493514 4495008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00504 1 344 Chloroplast and Mitochondria Gene Families AT1G72820 65.819 1.75e-162 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00504 K15121 - gmx:100784202 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00504 04 4493514 4495008 Gma04g00504 04 4493514 4495008 ECH
Gma04g00504 04 4493514 4495008 Gma06g00493 06 4206632 4208105 ECH
Gma04g00504 04 4493514 4495008 Gma06g00493 06 4206632 4208105 GST