Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00500 ATGACAGATAAAAATCCAAGACCACCAGATTCACCTGACGATGATTTCACCAACCAATGGCCTTTGGAGCTCTCCGAGTACTTGAATTTTGATGATGATCAATGGCCAGACGATTACCCGGAATCATTTGTTTCGGGGCATGTCTTCAGCCATAACAATCAAGCCAATGAAGTTGGTAACTTTGGAGGAAGTAGCACCCACTTTGAAGAGTCTTCTAGCAGAGACGTTGGCAATGAACGTGAGAAGAAGGAAGTCAGAGATAGAGTTGCATTCAAAACAAAGTCAGAGGTAGAAATACTGGACGACGGGTTCAAGTGGAGGAAGTACGGAAAGAAAATGGTGAAAAACAGCCCCAATCCAAGGAACTACTATAGGTGTTCAGTGGACGGATGCCAGGTCAAAAAGAGAGTTGAAAGAGACAAGGATGATCCAAGGTATGTAATAACAACCTACGAAGGCATCCACAATCACCAGAGTTATATCTAA 486 0.4321 MTDKNPRPPDSPDDDFTNQWPLELSEYLNFDDDQWPDDYPESFVSGHVFSHNNQANEVGNFGGSSTHFEESSSRDVGNEREKKEVRDRVAFKTKSEVEILDDGFKWRKYGKKMVKNSPNPRNYYRCSVDGCQVKKRVERDKDDPRYVITTYEGIHNHQSYI 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00500 161 Gene3D WRKY domain 87 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma04g00500 161 SMART WRKY_cls 100 159 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma04g00500 161 ProSiteProfiles WRKY domain profile. 95 160 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma04g00500 161 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 11 159 IPR044810 GO:0003700
Gma04g00500 161 MobiDBLite consensus disorder prediction 55 71 - -
Gma04g00500 161 Pfam WRKY DNA -binding domain 101 158 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma04g00500 161 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 11 159 - -
Gma04g00500 161 SUPERFAMILY WRKY DNA-binding domain 93 158 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma04g00500 161 MobiDBLite consensus disorder prediction 55 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00500 Gma-Chr4 4471178 4472569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00500 33 159 WRKY Transcription Factor Family AT5G26170 58.741 1.59e-47 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma04g00500 WRKY 2.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00500 - - gmx:100819462 348.591
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00500 04 4471178 4472569 Gma04g00500 04 4471178 4472569 ECH
Gma04g00500 04 4471178 4472569 Gma06g00490 06 4184809 4191375 GST