Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00491 ATGTCTGTTCAACAGCCGCCATGTGCCGCCCCGCTGCAAAACACCACAATGGTGGCTGTTGACAAAGACAAAAACAGTGTTCATGCTTTCCGTTGGGCCGTTAATCACCTCGACAACCCCATCATCATTGCCGTCCATGTCAAGCACAAAAACTTTTCTCATCATGTCACCAATGTGTTTCCACCCGACGAAGAGGATGTAGCCAATATTTTCAATACCTTGCGTGGAATGTGTACCCGCAAAGCTGTCAAGATGAAAGAAGCCGTAATCGATGATAGTGATGTTGTGAGAGGACTTTTAGAGTATGCAAACAGGAATGCCATACATAGTATCGTGGTCGGTGCATCCACAAAAAACCCTTTGATAAGCCTCAAAAAATTTAAAACCTATCAGTATCAGGATATACCAACAGCCATGATCAAATCAGCCCCAGATTACTGCTCTGTGTACATAATTTCCAAATTGAAGATTGTGTCAGCTCGATCAGCGGTACGGTCAATGTCAAAAGGTTTTATGGCACCGAAACAACTTCCTGTGCAGGCATGCCCACCTAGTGAACCAGAAGGTGGATCAGTAAGGGGACAACCACCAAGAAGTAGGAGCACTTACGAAGGACCAGTAGAACCAATGAGAATACAGGCACGTGAGAGGCCAAGGAGTGCGGGTAGTATGTCAATAGACATTAACATTGATGTACACACTCATCCACGACATTGGTCAATGGATGAAAGAGAAATTGCAGGGCTTGTGACAATGGATGTGACTAAGCAAGATTCTATTCCTGATGTATCAGATTCCTTCGGGACATCAGGTCCTCAGTCCTCAAAAGAGCTTGAAGCCGAGATGAAAAGATTGAGGCTTGAACTGAAGCAAACTATGGACATGTACAGCTCAGCTTGCAAGCAAGCAATCTCAGCCAAAAATCAGGCAGAACAAATTCGTCAATGGAAAATGGAAGAGGACCGTAAGGTTGAGGTAGTTAGGTTGTCTCAAGAGGCAGCTCTTGCACTGGCAGAAAGGGAGAAGATTAGAGCCAAAGCTGCATTGGAAGCAGCTGAGGAGGCCAGGAGGAGGGCAGAACAGGATGCACAGAGAAGAAAGGATGCAGAGATGAAAGCCAGGTTAGAGGCAGAAGAGAAGGAACGTGCATTATCTGCGTTGGCTCATAACGATAACCGGTATAGAAAATACACTATAGTGGAGATTGAAGCAGCCACAGAAAAGTTCTACCCATTAAACAAAATTGGTGAAGGTGGATATGGACCTGTGTATAAAGGCCACCTTGATCACACCCCAGTTGCAATCAAAATTTTAAGGCCTGATGCTGTTCATGGCATGAAGCAGTTCCAACAAGAGATTGAGGTACTAAGCTGCATTAGACATCCGCATATGGTCCTCCTCCTCGGTGCATGTCCTGAGCATGGGTGCTTGGTGTATGAATACATGGATAATGGAAGCTTAGAAGATAGATTATACCGAAAAAATAACAGCAGGCCAATTTCATGGAGGAAACGGTTCCAAATAGCTGCTGAGATTGCAACTGCACTCCTCTTCTTACACCAAAACAAGCCAGAGCCTATTGTGCACAGAGACCTTAAACCATCAAACATTCTCTTGGACAGGAATTACGTGAGTAAAATCAGTGACGTTGGTCTGGCACGGTTAGTCCCCGCTTCTGTAGCTGATACTATGACACAATATTACATGACTTCCGCTGCTGGAACCTTTTGTTACATTGATCCTGAGTATCAACAAACGGGAATACTAACAACAAAGTCAGATGTATATTCTCTGGGGATAATGCTACTGCAGATAATCACAGCCAAGCCTCCCATGGGACTTGCTCACATAGTTAAGAAGGCAATTGAAAAGGGTAGGTTTGAAGAGATTCTTGACCCTGTGGTCACTGATTGGCCAGTGGAAGAGGCTCTATCATTTGCCAAATTACCATTGAAGTGCTCAGAACTCAGCAAGAAGGACAGGCCAAACCTTGCAACAGTTGTGTTGCCAGAGCTTAATAGGTTAAGCGAACTTGAATTGACTTTACACAATGATCAAGTTTTTTACAGTAGTGAAGGTATGATCAATAGCTATGCCGCTTGCCCTCCCACACCTCCAAGAAGTCATTACTCTGACTCAGAGACGTTATATACGATCTAG 2160 0.4444 MSVQQPPCAAPLQNTTMVAVDKDKNSVHAFRWAVNHLDNPIIIAVHVKHKNFSHHVTNVFPPDEEDVANIFNTLRGMCTRKAVKMKEAVIDDSDVVRGLLEYANRNAIHSIVVGASTKNPLISLKKFKTYQYQDIPTAMIKSAPDYCSVYIISKLKIVSARSAVRSMSKGFMAPKQLPVQACPPSEPEGGSVRGQPPRSRSTYEGPVEPMRIQARERPRSAGSMSIDINIDVHTHPRHWSMDEREIAGLVTMDVTKQDSIPDVSDSFGTSGPQSSKELEAEMKRLRLELKQTMDMYSSACKQAISAKNQAEQIRQWKMEEDRKVEVVRLSQEAALALAEREKIRAKAALEAAEEARRRAEQDAQRRKDAEMKARLEAEEKERALSALAHNDNRYRKYTIVEIEAATEKFYPLNKIGEGGYGPVYKGHLDHTPVAIKILRPDAVHGMKQFQQEIEVLSCIRHPHMVLLLGACPEHGCLVYEYMDNGSLEDRLYRKNNSRPISWRKRFQIAAEIATALLFLHQNKPEPIVHRDLKPSNILLDRNYVSKISDVGLARLVPASVADTMTQYYMTSAAGTFCYIDPEYQQTGILTTKSDVYSLGIMLLQIITAKPPMGLAHIVKKAIEKGRFEEILDPVVTDWPVEEALSFAKLPLKCSELSKKDRPNLATVVLPELNRLSELELTLHNDQVFYSSEGMINSYAACPPTPPRSHYSDSETLYTI 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00491 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Gma04g00491 719 PANTHER OS02G0152300 PROTEIN 15 697 - -
Gma04g00491 719 Gene3D Transferase(Phosphotransferase) domain 1 482 690 - -
Gma04g00491 719 Gene3D HUPs 9 127 IPR014729 -
Gma04g00491 719 Pfam Universal stress protein family 17 121 IPR006016 -
Gma04g00491 719 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 121 - -
Gma04g00491 719 Coils Coil 275 295 - -
Gma04g00491 719 MobiDBLite consensus disorder prediction 175 221 - -
Gma04g00491 719 CDD STK_N 15 154 - -
Gma04g00491 719 Gene3D Phosphorylase Kinase; domain 1 378 481 - -
Gma04g00491 719 Pfam Protein kinase domain 412 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00491 719 ProSiteProfiles Protein kinase domain profile. 409 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00491 719 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 15 697 - -
Gma04g00491 719 Coils Coil 335 372 - -
Gma04g00491 719 SMART serkin_6 409 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00491 719 SUPERFAMILY Protein kinase-like (PK-like) 393 668 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00491 Gma-Chr4 4386347 4390370 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00491 85 678 Receptor kinase-like Gene Family AT5G12000 58.306 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gma04g00491 Pkinase 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00491 - - gmx:100798861 1369.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00491 04 4386347 4390370 Gma04g00491 04 4386347 4390370 ECH