Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00483 ATGGGTGCCTCAGGAAAATGGGTAAAGGCATTAATCGGACTCAAGAAACCAGACAAAGACGACCATGTGAAGGAGGGTGGTGGTAAGAGCAAGAGGTGGAGGCTATGGAGGAGTTCTTCAGGGGACACGGGGGGTTCTTGGAAGGGTTTCAAAGGAGGAAACTACAGAGCAGCTTCTGAAGTGGGGTCTGATTCTTCTCCACCTGTTGTAGCAGCAGATGCAGATGCTGCTTTCACAGCCGCTGTAGCCACTGTAGTTCGAGCTCCACCTAAGGATTTCAGACTCGTCAAGCAAGAATGGGCAGCTATAAGAATCCAAACTGCTTTCCGCGCCTTCTTGGCAAGAAGGGCTTTGAGGGCATTGAAGGGAGTGGTGAGGATTCAAGCGCTTGTTCGGGGGAGACAGGTGAGGAAGCAGGCTGCGGTGACATTGAGGTGCATGCAGGCCTTGGTTCGAGTTCAGGCCAGAGTAAGAGCTCGTCGTGTGAGGATGTCCATAGAGGGGCAAGCTGTGCAGAACTTGCTCAACGAGCGACGGAGTAAGCTTGATCTTTTGAAGCAAGCTGAGGAAGGATGGTGTGACAGCAGAGGAACGTTGGAAGATGTTAAGACAAAGATACAAATGAGGCAAGAAGGAGCTTTCAAAAGGGAAAGAGCAATGGCTTACTCTCTTGCTCACAAGCAATGCAGATCAACTCCAAGCTCTAATTCACGAACAAATGCCTCTTTTTCCTCTCTCAAGAGTCATGAGATGAACAAAGCTAACGGTGGGTGGAGTTGGTTGGAGCGTTGGATGGCAGCCAAGCCTTGGGAGAGTAGATTGATGGAACAATCACAATCTCAGGCTGAAGCCTTAGATAAAACCCCAACTCCAAAGAAGTTTGTGGAATCCTTTGTGAGCTCTAATTCCAAACCATGCACGGTCAAAGTCAAGAAAAACAACGTGACAACAAGGGTTTTTGCTAGGCCACCCCTGGTTGGGCAAGCTACACGCTCATCCTCAAGTCCAAGTTCCGAGTTTCGATACGATGAGAGTTCTGCATCATCCTCCATTTGTACATCTACAACACCAATGTCTGGGAACACTTGTGACAGGACTGAGGATAGTAATGGTAATGCTGTTGCTAGGCCTAATTACATGAACCTGACTCAGTCCACAAAGGCAAAGCAAAAGACAAGTAGTAATCATGTGTATAATAGAGCTCAGAGGCAGCAATCCATGGATGAGTTTCAATTTCTCAAGAGGGCAGCGGTTTTCTCCAATGGAGATTCCAAAAGCACGGCTGGTTCTGACCCTTCAATCAACTTTTCTAGGCCACTTCACTTGGACAAGAGTTCAGTTATGACACGTTGA 1353 0.4797 MGASGKWVKALIGLKKPDKDDHVKEGGGKSKRWRLWRSSSGDTGGSWKGFKGGNYRAASEVGSDSSPPVVAADADAAFTAAVATVVRAPPKDFRLVKQEWAAIRIQTAFRAFLARRALRALKGVVRIQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQNLLNERRSKLDLLKQAEEGWCDSRGTLEDVKTKIQMRQEGAFKRERAMAYSLAHKQCRSTPSSNSRTNASFSSLKSHEMNKANGGWSWLERWMAAKPWESRLMEQSQSQAEALDKTPTPKKFVESFVSSNSKPCTVKVKKNNVTTRVFARPPLVGQATRSSSSPSSEFRYDESSASSSICTSTTPMSGNTCDRTEDSNGNAVARPNYMNLTQSTKAKQKTSSNHVYNRAQRQQSMDEFQFLKRAAVFSNGDSKSTAGSDPSINFSRPLHLDKSSVMTR 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00483 450 MobiDBLite consensus disorder prediction 421 450 - -
Gma04g00483 450 Gene3D - 96 145 - -
Gma04g00483 450 MobiDBLite consensus disorder prediction 18 44 - -
Gma04g00483 450 Pfam IQ calmodulin-binding motif 122 139 IPR000048 GO:0005515
Gma04g00483 450 Pfam IQ calmodulin-binding motif 100 119 IPR000048 GO:0005515
Gma04g00483 450 ProSiteProfiles IQ motif profile. 98 126 IPR000048 GO:0005515
Gma04g00483 450 MobiDBLite consensus disorder prediction 18 36 - -
Gma04g00483 450 ProSiteProfiles IQ motif profile. 122 149 IPR000048 GO:0005515
Gma04g00483 450 Coils Coil 171 191 - -
Gma04g00483 450 MobiDBLite consensus disorder prediction 349 378 - -
Gma04g00483 450 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 449 - -
Gma04g00483 450 PANTHER IQ-DOMAIN 5-RELATED 1 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00483 Gma-Chr4 4306130 4308544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00483 1 440 IQD Protein Family AT2G26180 59.864 7.60e-147 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00483 - - gmx:100799714 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00483 04 4306130 4308544 Gma06g00475 06 4055860 4057924 GST
Gma17g02176 17 39400123 39402777 Gma04g00483 04 4306130 4308544 PCT
Gma14g00880 14 9553099 9555653 Gma04g00483 04 4306130 4308544 PCT
Gma04g00483 04 4306130 4308544 Gma17g02176 17 39400123 39402777 PCT
Gma04g00483 04 4306130 4308544 Gma14g00880 14 9553099 9555653 PCT