Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00469 ATGGAGAGTGATATGTACACCGCTGCACTGGGCATTTCTGGCCGAGATGCTAGAGTAATAGATGAAATTTCCCAACATTCCACCTCAAATCCTCTCGTTCAGTGCTATTCACTTGACCTTAACAACCAATCCCACATCATAAATGGAATTTCAATGCTTTCTGGAGAGCAAGGTGAACCTATAAATAATGTCCATGGTGATGCTTGCTTCATTAATCCTTCAATTATTGCGGACTCTAGTCCGTTAGTTACATCACAAGGAAAAACTATTGTGGGAGATGCCTCAAGTCCTATGGAGAACACCGAGTTTCAAGAGCATTTAGTTGGAGGAATGTCAATTACTCCCTCTTCCCTTGTTGCCATTCTTGCTGCTAGAATTGGTTTTGAAGAAAATTTGGAGAACTCATCATCAGCCTTGCCTCCCTCCCTCTGCTCAATAGGGGCACTGGGGGCATTCTTCAACAATTTGCAAGGTACTTCAAATTCAAACCCTTTGTCTGCAACTTTTGAGGACTGTGGTTACAATGAAGTTCCTGGTAATTGGAATGCTAACAAGTTTCCTAAAGCTCCAGAGATTCATGGAACTGGGTGTCAGCCTTATTCTTCTTTAGCAAATCTTGATCCAAATGAATGGACATCATCAAATCTAGCAAACATGGCCAATCATGCTAACCATTCCTCTAGCTTTAGTAAGGAACTTTCTCTAAGTCTCGCAACATCGACAACCACAGGACAATGCTCAGAGGTAAGTTGCTCTAATGTGACCCCATGCATGAATGGAACCATGTCAGGCTTGGAGCAAGCCTTCTGCGGCAGTAGTAGGGAACTTTCTATGAACTTGGGTGGTGATAAATATGTACAGTTTTCACCAAAAGTACTGGAATCGAGATATCTCATTGGGATTCGAGAGATACTTGCTCAAATTGCAAGATATTCATTTGAAAATCTAGAACAGTTAAATTATTCAGCTTCTGGTAATAGATCAGGTGGAAACAAGTCAAGTTCAGCTTTCCCACCCAAGAGAAGAATATTGATAGATAACAATGCAAATTCTACGTATGAAGCTCATGCAGAGCCTCCACTGCAAAGGCATGCTGCTGAATCAAAGAAAGCCCAACTCCTGGCACTTCTACAACTGGCGGACAATCGATATAGCCAGTGTTTGGATGAGATACATACTGTTGTATCCGCTTTCCATGCTGCTACAGAGCTGGACCCGCAAATACATGCACATTTTGCTCTTCAAACCATCTCTATCCTTTACAAGGACCTACGAGAGAGGATCAGCAATTATATTCTTGCCATGGGATCAAATTTCAACAACTCGTGCTCAGAAGAGAATGAATGGTCTGCTGAAACTTCATTCCTTCAGAAGCAATGGGCTCTCCAGCAGTTGAATAGAAAAGATCAGTTGTGGAGGCCACAAAGAGGCTTGCCAGAAAGATCAGTCTGGGTTCTACGGGCTTGGATGTTTCAGAATTTCCTGCATCCGTATCCTAAAGATGCAGAGAAGCATTTACTTGCAGTAAAAAGTGGGTTGACGAGAAGCCAGGTATCCAATTGGTTTATAAATGCTCGTGTTCGTCTGTGGAAACCTATGATCGAAGAGATGTATGCTGAAATGAATAAAAGAAAGGCTTGTCGAAATGAAGAAGGAATGCAGAGCAACCACGGAAACAGGATAAGCATGAGCAATCAAAGGTTTAATCAGTGTCAACTATAG 1722 0.421 MESDMYTAALGISGRDARVIDEISQHSTSNPLVQCYSLDLNNQSHIINGISMLSGEQGEPINNVHGDACFINPSIIADSSPLVTSQGKTIVGDASSPMENTEFQEHLVGGMSITPSSLVAILAARIGFEENLENSSSALPPSLCSIGALGAFFNNLQGTSNSNPLSATFEDCGYNEVPGNWNANKFPKAPEIHGTGCQPYSSLANLDPNEWTSSNLANMANHANHSSSFSKELSLSLATSTTTGQCSEVSCSNVTPCMNGTMSGLEQAFCGSSRELSMNLGGDKYVQFSPKVLESRYLIGIREILAQIARYSFENLEQLNYSASGNRSGGNKSSSAFPPKRRILIDNNANSTYEAHAEPPLQRHAAESKKAQLLALLQLADNRYSQCLDEIHTVVSAFHAATELDPQIHAHFALQTISILYKDLRERISNYILAMGSNFNNSCSEENEWSAETSFLQKQWALQQLNRKDQLWRPQRGLPERSVWVLRAWMFQNFLHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVRLWKPMIEEMYAEMNKRKACRNEEGMQSNHGNRISMSNQRFNQCQL 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00469 573 CDD homeodomain 472 533 IPR001356 GO:0003677
Gma04g00469 573 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 10 568 - -
Gma04g00469 573 Gene3D - 475 554 - -
Gma04g00469 573 ProSiteProfiles 'Homeobox' domain profile. 491 532 IPR001356 GO:0003677
Gma04g00469 573 Pfam Homeobox KN domain 489 528 IPR008422 GO:0003677|GO:0006355
Gma04g00469 573 PANTHER HOMEOBOX PROTEIN ATH1 10 568 - -
Gma04g00469 573 SMART prehox3 286 430 IPR006563 -
Gma04g00469 573 SMART HOX_1 472 536 IPR001356 GO:0003677
Gma04g00469 573 Pfam Associated with HOX 292 429 IPR006563 -
Gma04g00469 573 SUPERFAMILY Homeodomain-like 474 541 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00469 Gma-Chr4 4195734 4197885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00469 232 545 Homeobox Transcription Factor Family AT4G32980 55.346 3.06e-103 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Gma04g00469 POX 2.2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00469 - - gmx:100820354 1117.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00469 04 4195734 4197885 Gma04g00469 04 4195734 4197885 ECH
Gma04g00469 04 4195734 4197885 Gma06g00463 06 3958789 3960808 GST
Gma17g02199 17 39700949 39703872 Gma04g00469 04 4195734 4197885 PCT
Gma04g00469 04 4195734 4197885 Gma17g02199 17 39700949 39703872 PCT