Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00452 ATGGGCTTTGATATCTCTAAACCAGGGCTTCGACTTGGTCTTGGTCTTGGTCTCCATGATGATCACTCATCAGAAAATTGCATGAAGACCAATGAACAAAGCCAAAGGCAAAGACAAAGCCAGAAGAAAAAGGAAACAGATCCATGTAACAAGGCTTACCCATCACTTAAGTTAGGACCACCCGATGATGAGGCAAACAATAATAATCAACAAATTACAAATATTGAATCCGATGAATACTATTATTTCCACCCACATGCCTCTTCTAGATCTCCAAGTGCAGTGTCTTCATTTTCCAACTCATCTAGCATCATCAAGAGAGAGAGAGAACAACTTGAGTTAGAGGTAGAGAAGATTTCGCTGTCAAGGGATTTTGTCGATGTTGACGAAAATGGTAACCCCAAGAAGAAACTTAGGCTCACCAAAGAACAATCTGCAGTCTTAGAAGATAGCTTCAAAGAGCATTATACTATCAGTCCGAAACAGAAGCAAGAATTGGCAAAGAAACTGAATCTTCGGACTAGACAAGTGGAGGTGTGGTTTCAGAACAGAAGAGCGAGGACAAAACTGAAACAAACCGAAGTGGAGCGTGAGTTACTGAAAAAGTGCTGTGAAACTCTAACTGAGGAGAACAAGATGCTGGAAAAAGAGTTGCAAGAGCTCAAATCGACGAAAACATCGATGGGACCCTTTTATATGCAGCTTCCAGTGGAAAGCCTTAGAATATGCCCTTCGTGTGAGAGAATAAGCGGTGGCAACAATGGCTCCTCTCCCACAACGGCTTTGCTTGAAGCCCCAAAGGCCCATAAAGATCAGCCCTTCTATAAAAATAACTACACATTCACCCAATCATCCGCAGCTTTTGCTAGCTAG 873 0.4227 MGFDISKPGLRLGLGLGLHDDHSSENCMKTNEQSQRQRQSQKKKETDPCNKAYPSLKLGPPDDEANNNNQQITNIESDEYYYFHPHASSRSPSAVSSFSNSSSIIKREREQLELEVEKISLSRDFVDVDENGNPKKKLRLTKEQSAVLEDSFKEHYTISPKQKQELAKKLNLRTRQVEVWFQNRRARTKLKQTEVERELLKKCCETLTEENKMLEKELQELKSTKTSMGPFYMQLPVESLRICPSCERISGGNNGSSPTTALLEAPKAHKDQPFYKNNYTFTQSSAAFAS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00452 290 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 5 290 - -
Gma04g00452 290 MobiDBLite consensus disorder prediction 1 69 - -
Gma04g00452 290 CDD homeodomain 134 192 IPR001356 GO:0003677
Gma04g00452 290 MobiDBLite consensus disorder prediction 36 50 - -
Gma04g00452 290 Coils Coil 190 224 - -
Gma04g00452 290 SUPERFAMILY Homeodomain-like 128 192 IPR009057 -
Gma04g00452 290 ProSitePatterns 'Homeobox' domain signature. 166 189 IPR017970 GO:0000981|GO:0006355
Gma04g00452 290 ProSiteProfiles 'Homeobox' domain profile. 131 191 IPR001356 GO:0003677
Gma04g00452 290 SMART HOX_1 133 195 IPR001356 GO:0003677
Gma04g00452 290 PANTHER - 5 290 - -
Gma04g00452 290 Pfam Homeodomain 135 189 IPR001356 GO:0003677
Gma04g00452 290 Gene3D - 128 197 - -
Gma04g00452 290 SMART halz 191 235 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00452 Gma-Chr4 4064735 4066744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00452 105 249 Homeobox Transcription Factor Family AT4G37790 60.645 9.94e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Gma04g00452 Homeodomain 4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00452 K09338 - gmx:100790927 536.184