Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00444 ATGGGTGGCCGTGAAAATGCATTGGGGCTTCAAAGTGTTTCAGAAACGACAGTAATTAGTTCTGTGTCTATGGCTATGCCTTCAGGAGTCGTGGCTAACCCTTTTCTTGCTTCTTCTGCTTGGGATCCACTTGTTCCATTGAGTCAAACTTTGGGAGGCTCTCTTATGGTTTCTCATAGTGAGTTTGCCAATTCAGCTTACCCTTCTGTTTTGGAAAACCAGGGAATGAACTGTGACTCTCACTTTGTTCAATATGTATCTGACTCAAATTTTGAGCACATGGCCCTTAAGGTTCCCTCCTTTGGCCAAACCGGTTCTTATGATATAGCTAACACAGGGTATCTGCCAAATCATAATCCGAGTAATGAGTCTGGAATGGAAAGGAGTCCAATAAACAATGAGCAATCTAAGCTCGAAGGTTCAACTTCTGAAGAAGGAGCTGCACCTGATGAACACAAAAGAAAGCGTGGACTTGACTATAATTTTACTTTCAGTTCAAATAAGAATGCTGAGGGGGAAGCACTTAAAGATTCTTCTGGGAAGAGCTGTGATGATGATGTGAAAGAACAATGTGAAAAGAAGCCTAGAGTTGCACAAAATAGTACTGCTAACTTATGTGGAAAGCAATTGCTGAAGCAAAAGAAAGATGACTCCGAGAGTGAAGAAGGTTCCAAAGAAAATTTCATTCATGTGAGAGCCCGAAGAGGTCAAGCTACAAACAGTCACAGCCTTGCAGAAAGGGTGAGGAGAGAAAAGATTAGTGAGCGAATGAGGTTACTTCAAGAACTTGTTCCAGGATGCGATAAGAAAACGGGTAAAGCGGTAATGCTGGATGAGATTATAAACTATGTGCAATCACTGCAACAACAGGTTGAGTTTTTGTCCATGAAACTTGCCACTGTAAATCCACAATTGAATTTTAATGTAGAGCAGATCTGTTCCAAAGATTCACACATTGGACATGGACCTATTGGTGGATATGGTGCCAGCATCAGCATGCCTAACCCATCAACACAATTCCCTCCAATGCCACAGTCTGTTTTGAACCAAAGCTTTTATGAAACAAGTTACAATACCATTACAGCTCTTGACAATTTGGGAACCAGTGGATGGTTGAAAACAGAGTTATAG 1131 0.4138 MGGRENALGLQSVSETTVISSVSMAMPSGVVANPFLASSAWDPLVPLSQTLGGSLMVSHSEFANSAYPSVLENQGMNCDSHFVQYVSDSNFEHMALKVPSFGQTGSYDIANTGYLPNHNPSNESGMERSPINNEQSKLEGSTSEEGAAPDEHKRKRGLDYNFTFSSNKNAEGEALKDSSGKSCDDDVKEQCEKKPRVAQNSTANLCGKQLLKQKKDDSESEEGSKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCDKKTGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPQLNFNVEQICSKDSHIGHGPIGGYGASISMPNPSTQFPPMPQSVLNQSFYETSYNTITALDNLGTSGWLKTEL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00444 376 CDD bHLH_AtBPE_like 227 312 - -
Gma04g00444 376 Gene3D - 234 311 IPR036638 GO:0046983
Gma04g00444 376 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 237 287 IPR011598 GO:0046983
Gma04g00444 376 Pfam Helix-loop-helix DNA-binding domain 240 288 IPR011598 GO:0046983
Gma04g00444 376 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 235 306 IPR036638 GO:0046983
Gma04g00444 376 MobiDBLite consensus disorder prediction 112 159 - -
Gma04g00444 376 MobiDBLite consensus disorder prediction 144 159 - -
Gma04g00444 376 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 18 376 - -
Gma04g00444 376 SMART finulus 243 293 IPR011598 GO:0046983
Gma04g00444 376 MobiDBLite consensus disorder prediction 112 142 - -
Gma04g00444 376 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 18 376 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00444 Gma-Chr4 3948447 3951254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00444 1 376 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 39.801 1.34e-64 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma04g00444 HLH 3.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00444 - - gmx:100787749 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00444 04 3948447 3951254 Gma04g00444 04 3948447 3951254 ECH