Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00437 GTTATTCTGATGATATTGGCAGCAAATGCGGCGGTTGGAGTGATTACAGAAACAAACGCTGAAAAAGCTCTTGAGGAGCTACGTGCTTATCAAGCTGATGTGGCAACAGTCTTGCGCAATGGTTGTTTTTCCATACTTCCTGCAACTGAACTTGTTCCTGGGGATATTGTGGAAGTTTCTGTGGGGTGCAAAATTCCTGCTGATATGAGGATGATTGAAATGCTAAGCAATCAAGTGCGGGTTGATCAAGCTATTCTTACAGGTGAGAGCAGCTCCGTGGAGAAAGAGCTTAAAACAACCACAACAACAAATGCTGTATACCAAGACAAAACAAATATTCTGTTCTCGGGTACGGTTATGGTTGCTGGTAGGGCAAGAGCTGTTGTGGTGGGAGTTGGTCCTAACACTGCCATGGGCAGCATTCGCGATTCAATGTTGCGAACAGAGGATGAGGTGACACCGTTGAAAAAGAAGCTGGATGAGTTTGGTACCTTTTTGGCCAAGGTTATAGCAGGGATTTGTGTTTTAGTGTGGATTGTAAATATTGGTCACTTTCGTGACCCTTCTCATGGTGGTTTCTTGCGTGGTGCAATTCATTATTTTAAGATTGCAGTTGCTCTGGCTGTTGCAGCCATTCCAGAAGGGCTCCCTGCAGTTGTTACAACATGTTTGGCTCTTGGAACAAAGCGTATGGCTAAGTTGAATGCCATTGTTCGCTCCTTGCCATCGGTTGAGACCTTGGGCTGCACCACTGTTATTTGCAGCGACAAAACTGGTACTCTAACTACCAATATGATGTCTGTTGCAAAGGTGTGTGTTGTAGAATCTGCAAAGCGTGGTCCTGTTGTTTCGGAATACAGTGTCAGTGGAACAACATATGCACCTGAAGGCATAATATTTGACAGTACAGGGTTGCAGCTTGACTTTCCTGCTCAATTGCCTTGTCTTCTTCACATGGCAATGTGTTCTGCTCTTTGCAATGAATCGACCCTGCAGTATAATCCTGATAAAGGGAATTATGAAAAAATTGGTGAGTCAACTGAAGTGGCACTACGTGTCTTAGCCGAAAAGGTTGGTCTCCCTGGTTTCAATTCTATGCCATCATCCTTGAATATGTTGACTAAGCATGAACGTGCTTCTTACTGTAACCATTATTGGGAGGAACAATTTAGAAAGATACATGTTTTGGAGTTTTCTCGAGATCGGAAAATGATGAGTGTCCTTTGCAGCCGGAACCAGATGCATGTTTTGTTCTCAAAGGGTGCCCCAGAAAGTATAATATCTAGATGTACAAGCATTCTGTGCAATGATGATGGTTCCATTGTGTCACTTACCGCTGATATTCGAGCAGAGCTGGACTCAAGGTTCCACAGTTTTGCGGGAAAAGAAACATTAAGATGCCTTGCTTTGGCCCTGAAATGGATGCCCTCAACTCAACAGTCGCTGTCCTTTGATGATGAGAAAGATCTTACATTTATTGGGTTGGTTGGGATGCTGGATCCTCCAAGAGATGAAGTAAGAAATGCAATGCTTTCGTGTATGACTGCTGGCATACGTGTTATAGTTGTAACTGGGGACAACAAGTCCACTGCTGAGTCACTTTGCCGCAAGATAGGTGCTTTTGATCAATTGATAGATTTTGCTGAACATTCTTACACTGCTTCTGAGTTTGAAGAACTTCCAGCACTGCAACAAACTATAGCATTGCAACGTATGGCACTTTTTACCAGGGTTGAGCCTTCTCATAAAAGGATGCTGGTTGAAGCATTACAGCACCAGAATGAAGTGCAACATGCTTCTGATATCGAAATGGATATGAGGTTTTGGCACGATGTCTTTGATTTGTATTTTGTCTGTGGCAAGGAGTCAAGGGGACGCCAAGATGATGATCTTGTTTTCTTTGTCAGAAAATTGGGTTCCCATGGTTCTGGTTCCAACAATAAAACAGAGAGCGTTGATCCTTATTTTGTACGCAGGTGGGCACCTAAGTTGAGCAACTTAGTTGATGAAACTTCTATAGATGTGAACTGGAGGCGTTCATTTTACTTGAATCTAATTGCTCATACATCATTCAGTGTAACTGTTGCAATTTGCAGTCACCAGGATCTTCTGAACCATCGAgctgggcaggatacacctgctgggcaggatacacctTTATCCCCTATATATAAGGTTGTGAAGACTGTTTATGCATCCCCAAGTCGTGTAAATTTTCAATTGGACTCTGAAAAGGCAATGGAAACGACTCCTGCTTATCCAGATATATGTTTCGCAATTGATGATTTTGACTCCACTTTTGATGCTGTGGTTTTGACTGAAAAAGATCATTGCTATTGTGTAGTTCTTAACGCACATGATGGGGCAGCATTTCCGAGTGAAAAGGTGGCCAATGATTGTAGTACTAGTGATAGCTCCTCTTTGCCAGTCCATTCTAGTTCTGCAAAGAAAAGGAATACAAAGCTTACACTTTTATCAGGATTTGTCAGCTATCAGATGGTCCGAGATGCTTATGATGCTGGTAGGTCTCGATTTGGGAGCCTTTTATCCGTGGGCCATTCTTCAGGCAAAACAGACAGGATTTACATGAAAGGTCCTGGTGGCCGAGGGGAAGTTGAAGTAGCTGTTTCTGGTGTTGCGGATCAAAGCCAGCAGGATTCAGGCCCATTTTCGCCAGTTATATCAAAGAAAGGGTTTGGGCTTGGCGTCATTGTCCACAAAGCAGCATCTGCTGCATCAGTAGCAGCAAGGCATGCTTATGCAGCTGCCTCTGCCTCCAGCCCAAATTTTGATGAGTTGATACCTTTGAAATGCAGCTTAATGTCCATATCATTGCCCTGGGAATTTATTGCGTATGATCTTCTGTTTAAGGGAGCTCCTCCAGTGAACATGTGA 2895 0.4273 VILMILAANAAVGVITETNAEKALEELRAYQADVATVLRNGCFSILPATELVPGDIVEVSVGCKIPADMRMIEMLSNQVRVDQAILTGESSSVEKELKTTTTTNAVYQDKTNILFSGTVMVAGRARAVVVGVGPNTAMGSIRDSMLRTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMAKLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKVCVVESAKRGPVVSEYSVSGTTYAPEGIIFDSTGLQLDFPAQLPCLLHMAMCSALCNESTLQYNPDKGNYEKIGESTEVALRVLAEKVGLPGFNSMPSSLNMLTKHERASYCNHYWEEQFRKIHVLEFSRDRKMMSVLCSRNQMHVLFSKGAPESIISRCTSILCNDDGSIVSLTADIRAELDSRFHSFAGKETLRCLALALKWMPSTQQSLSFDDEKDLTFIGLVGMLDPPRDEVRNAMLSCMTAGIRVIVVTGDNKSTAESLCRKIGAFDQLIDFAEHSYTASEFEELPALQQTIALQRMALFTRVEPSHKRMLVEALQHQNEVQHASDIEMDMRFWHDVFDLYFVCGKESRGRQDDDLVFFVRKLGSHGSGSNNKTESVDPYFVRRWAPKLSNLVDETSIDVNWRRSFYLNLIAHTSFSVTVAICSHQDLLNHRAGQDTPAGQDTPLSPIYKVVKTVYASPSRVNFQLDSEKAMETTPAYPDICFAIDDFDSTFDAVVLTEKDHCYCVVLNAHDGAAFPSEKVANDCSTSDSSSLPVHSSSAKKRNTKLTLLSGFVSYQMVRDAYDAGRSRFGSLLSVGHSSGKTDRIYMKGPGGRGEVEVAVSGVADQSQQDSGPFSPVISKKGFGLGVIVHKAASAASVAARHAYAAASASSPNFDELIPLKCSLMSISLPWEFIAYDLLFKGAPPVNM 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00437 964 Coils Coil 20 40 - -
Gma04g00437 964 Pfam E1-E2 ATPase 31 233 - -
Gma04g00437 964 SUPERFAMILY Calcium ATPase, transduction domain A 33 144 IPR008250 -
Gma04g00437 964 SFLD Haloacid Dehalogenase 249 606 - -
Gma04g00437 964 SUPERFAMILY HAD-like 487 596 IPR036412 -
Gma04g00437 964 ProSitePatterns E1-E2 ATPases phosphorylation site. 256 262 IPR018303 -
Gma04g00437 964 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 261 498 IPR023299 GO:0000166
Gma04g00437 964 Gene3D - 269 498 IPR023299 GO:0000166
Gma04g00437 964 Pfam Cation transport ATPase (P-type) 324 433 - -
Gma04g00437 964 PANTHER CALCIUM-TRANSPORTING ATPASE SARCOPLASMIC/ENDOPLASMIC RETICULUM TYPE 1 597 - -
Gma04g00437 964 PRINTS P-type cation-transporting ATPase superfamily signature 494 505 - -
Gma04g00437 964 PRINTS P-type cation-transporting ATPase superfamily signature 254 268 - -
Gma04g00437 964 PRINTS P-type cation-transporting ATPase superfamily signature 82 96 - -
Gma04g00437 964 PRINTS P-type cation-transporting ATPase superfamily signature 516 526 - -
Gma04g00437 964 Gene3D - 75 268 - -
Gma04g00437 964 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 248 IPR023298 -
Gma04g00437 964 Gene3D - 499 599 IPR023214 -
Gma04g00437 964 PANTHER CALCIUM-TRANSPORTING ATPASE 1 597 - -
Gma04g00437 964 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 1 279 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma04g00437 964 Pfam Uncharacterized conserved protein (DUF2045) 606 879 IPR019141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00437 Gma-Chr4 3780031 3877973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00437 1 596 Primary Pumps ATPases(2) AT1G10130 82.718 0.0 1016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00437 K05853 - gmx:100783509 1156.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00437 04 3780031 3877973 Gma04g00437 04 3780031 3877973 ECH