Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00423 ATGGGACCTGGTGTTGGAGCCTTCCCTGATGGAGAACGGGATTGCTTTGGCAAAATGTTGGCCAATGAAGCCCATTATTGCTCACCACAATTACTTGAGGAAGATGATGGGAATGTTGGAATGCAATCCATGTTTTGCTCCACTCTTGATGTTGGGGGAAATAAGAATATGTTTTACTCTTTTGACTCTCACAACTCTAGTTTGCAGTATATTTCTCAAGAAAGCAGTCACAATAATAGCACTTGTTGTGGCCATAGTGTCTTCATGGCCAATCCGGAGGATCATACAAACTACCATTTTGGTCATGTTGATCATGTGCTAGCAAATAGTACATCCATGGATTTTTGCATGATAGATGAGAAAAACCCTGGCTCTTTTGTCCAATCTGACATTGTCATGAAAGAGAATGCCAGTTTGAATGAAGATGAGGGAAGTGACAAATCAGAGAATGTTTTTCCTGCCAAACATTTGAAGTTCAAAAGGATGTCTGATCATATGCCCGAACTCAAAGTGCATGTAGAAGATAAAATAAACTCACATGGGAATGGTAACAAAAAACCTCGTGTTTCAAAAGATGAGCAGCATTGCATGAAGAACCAGAAACTTGACAAAATTGGGAACCAGGCAGAAGAGATTAATGCAGGTTCAGATGGACACAGTTCTAGTAGTTACACTCGAGAGGATGATAATGCTTCTGCTCTCAACTTCAAAGGGAAAACAAAAGCTAGTAAGGGATCAGCAACAGATCCTCAGAGCCTTTATGCAAGGAAAAGAAGAGAAAGAATAGATGACAGGCTAAGAATTCTGCAAAATCTTGTCCCCAACGGAACAAAGGTTGATATAAGCACTATGCTTGAAGAGGCAGTCCAATACGTGAAATTTTTGCAGCTCCAGAACAAGCTTTTAAGCTCTGATGATTTGTGGATGTACGCTCCGATAGCTTATAATGGACTTGACCTCGTACTCAATCTCAATCCTAAGAGTTCTCCACCTTTGTGA 999 0.4054 MGPGVGAFPDGERDCFGKMLANEAHYCSPQLLEEDDGNVGMQSMFCSTLDVGGNKNMFYSFDSHNSSLQYISQESSHNNSTCCGHSVFMANPEDHTNYHFGHVDHVLANSTSMDFCMIDEKNPGSFVQSDIVMKENASLNEDEGSDKSENVFPAKHLKFKRMSDHMPELKVHVEDKINSHGNGNKKPRVSKDEQHCMKNQKLDKIGNQAEEINAGSDGHSSSSYTREDDNASALNFKGKTKASKGSATDPQSLYARKRRERIDDRLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQNKLLSSDDLWMYAPIAYNGLDLVLNLNPKSSPPL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00423 332 MobiDBLite consensus disorder prediction 174 196 - -
Gma04g00423 332 SMART finulus 252 301 IPR011598 GO:0046983
Gma04g00423 332 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 246 295 IPR011598 GO:0046983
Gma04g00423 332 CDD bHLH_AtIND_like 247 309 - -
Gma04g00423 332 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 4 330 - -
Gma04g00423 332 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 4 330 - -
Gma04g00423 332 Gene3D - 248 309 IPR036638 GO:0046983
Gma04g00423 332 Pfam Helix-loop-helix DNA-binding domain 256 296 IPR011598 GO:0046983
Gma04g00423 332 MobiDBLite consensus disorder prediction 237 257 - -
Gma04g00423 332 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 245 311 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00423 Gma-Chr4 3667657 3669067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00423 210 322 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 76.316 1.04e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gma04g00423 HLH 1.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00423 - - gmx:100779202 675.626