Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00420 ATGGCTTCGAAGAATTCTCAACAAGACACGCGCTTAGCGAGAATCGCCTCTGCAATCCGAGTCATCCCCGACTTTCCTAAGCCAGGAATTTTGTTTCAGGACATAACCACGCTGCTTCTTGATACAAAGGCTTTCAAAGACACCATTGACTTGTTTGTTGAGAGGTACAGAGATCAAAACATCAATGTTGTCGCAGGAGTTGAAGCTAGAGGCTTTATATTTGGTCCACCCATTGCATTAGCTATTGGAGCAAAATTTGTCCCCATGAGGAAACCCAATAAATTGCCTGGGGAGGTTATCTCAGAAGAGTATTCTTTGGAGTATGGAACAGACAAAATGGAGATGCATGTAGGGGCTGTACAACCTGGAGAACGAGCCCTAATCATAGATGATCTTATTGCCACTGGGGGAACGTTAGGTGCTGCAATTAAGCTTCTAGAACGTGTTGGGGTGCATGTTGTGGAGTGTGCTTGTGTGATTGAATTGCCAGAGTTAAAGGGGCGGGAAAGGTTGGGAGACAAGTCGCTATTTGTCTTGATTAATGGGGGAGCCTGA 555 0.4541 MASKNSQQDTRLARIASAIRVIPDFPKPGILFQDITTLLLDTKAFKDTIDLFVERYRDQNINVVAGVEARGFIFGPPIALAIGAKFVPMRKPNKLPGEVISEEYSLEYGTDKMEMHVGAVQPGERALIIDDLIATGGTLGAAIKLLERVGVHVVECACVIELPELKGRERLGDKSLFVLINGGA 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00420 184 Pfam Phosphoribosyl transferase domain 41 178 IPR000836 -
Gma04g00420 184 Hamap Adenine phosphoribosyltransferase [apt]. 15 182 IPR005764 GO:0003999|GO:0005737|GO:0006168
Gma04g00420 184 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 7 181 - -
Gma04g00420 184 SUPERFAMILY PRTase-like 17 176 IPR029057 -
Gma04g00420 184 PANTHER ADENINE PHOSPHORIBOSYL TRANSFERASE, PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN-RELATED 7 181 - -
Gma04g00420 184 CDD PRTases_typeI 49 180 IPR000836 -
Gma04g00420 184 Gene3D - 1 181 IPR029057 -
Gma04g00420 184 TIGRFAM apt: adenine phosphoribosyltransferase 16 180 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00420 Gma-Chr4 3645879 3650560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00420 1 184 PRT Gene Family AT1G27450 80.978 3.57e-109 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00420 K00759 - gmx:100305792 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00420 04 3645879 3650560 Gma04g00420 04 3645879 3650560 ECH
Gma04g00420 04 3645879 3650560 Gma06g00409 06 3522391 3527193 GST