Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00411 ATGAGTGCTCCGTCGCGAGAAGAGGAATCGGAGGCGAACCGGCTTCTAGAAGAAGCAGCATCATCATGGGAGGAAGAGGTGGCATACGAAGCGGGGGAGAAGATCCTGGTGGCGGATTTGGAGTTTGACAGGGTGGACGATGGGAGCGCTCCTCCTCCTTTCTCGTGGAAGAAGCTGTGGCTGTTCACTGGGCCTGGGTTCTTGATGAGCATAGCGTTTTTGGATCCGGGGAATCTGGAGGGGGATCTCCAGGCTGGGGCCATCGCGGGCTACTCCCTCCTCTGGCTCCTCATGTGGGCCACCTTCATGGGCCTCTTGATCCAGCTTCTCTCCGCCAGGGTCGGTGTGGCCACGGGCCGCCACCTCGCCGAGCTCTGCAGGGACGAGTATCCCAATTGGGCCCGCCTCGTGCTCTGGTTCATGGCCGAGCTGGCCCTGATTGGCGCTGACATTCAAGAGGTTATTGGAAGTGCCATCGCCATCCAAATTCTTAGCCGAGGCTTCTTCCCTCTCTGGGCTGGAGTTCTAATCACTGCTTCCGATTGCTTTTTCTTTCTATTTCTTGAGAACTATGGAGTGAGGAAGTTGGAAGCTGCTTTTGCGGTTCTCATCGCTGTCATGGGTCTTTCTTTTGCCTGGATGTTTGGTGATGCTCAACCTAATAGAGAAGAGCTTTTAATGGGTATTTTGGTTCCAAGACTTGGCTCAAAAACAATTCGTCAGGCTGTGGGTGTTGTGGGTTGTGTCATTATGCCTCACAATGTATTCCTGCATTCTGCTTTGGTTCAGTCAAGGAAGGTTGATCCTAAAAAGATAGGTCGGGTACAGGAGGCTCTCAACTACTATTCAATTGAGTCATCGGCTGCACTTGCAGTCTCCTTCATGATCAATCTTTTTGTCACCACAGTTTTTGCCAAGGGTTTTTATGGAACCAAGCAGGCAGATAGCATAGGATTGGTCAATGCAGGGCAGTATCTTGAAGAGAAGTATGGGGGAGGAGTCTTCCCTATTCTTTATATATGGGGGATTGGGTTATTGGCAGCTGGGCAGAGTAGCACCATCACTGGCACATATGCTGGGCAATTCATAATGGGGGGTTTCCTCAACCTTCGTTTAAAGAAATGGTTGAGGGCATTGATCACTCGAAGTTTTGCAATTGTGCCAACTATAATTGTAGCTATTGTTTTTAATAGATCCGAAGGCTCATTGGATGTTTTGAATGAATGGCTCAATGTGCTTCAGTCAATGCAAATTCCCTTTGCTCTAATTCCCCTCCTCACATTGGTCTCCAAAGAGCAGATCATGGGAACCTTTAGGGTTGGGCCTGTTCTTGAGAGAGTAGCATGGACTGTTGCTGGACTGATAATAATAATTAATGGATATCTCTTGTTAGATTTCTTCGTTTCTGAGGTGAATGGCATCTTGCTTGGTCTTTTAGCCTGCTCCTGCACAACAGCCTATATTGCGTTCATTGTATATTTGGTTTCACAGAGCGAATCAAGAGAACCAATGGTGTGGACTGCTGACAGCTCTGGCCTTTTGTGGGTGAGTTGGGCCTATCGTGCTTTACTGGACTTACAGTATCCATCGGAACATTCTGTGCTCTCTGCCATATGGAAATTGAATGTGGCTCCCAAAATCAAGTTTTTCATCTGGCGGATTGCTTTGAACAGGGTTGCTACAGGAGAACTTGAGAAAGAGGGGTATACATATCACAGAGGAAGAGTATAA 1731 0.483 MSAPSREEESEANRLLEEAASSWEEEVAYEAGEKILVADLEFDRVDDGSAPPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATFMGLLIQLLSARVGVATGRHLAELCRDEYPNWARLVLWFMAELALIGADIQEVIGSAIAIQILSRGFFPLWAGVLITASDCFFFLFLENYGVRKLEAAFAVLIAVMGLSFAWMFGDAQPNREELLMGILVPRLGSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKVDPKKIGRVQEALNYYSIESSAALAVSFMINLFVTTVFAKGFYGTKQADSIGLVNAGQYLEEKYGGGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSFAIVPTIIVAIVFNRSEGSLDVLNEWLNVLQSMQIPFALIPLLTLVSKEQIMGTFRVGPVLERVAWTVAGLIIIINGYLLLDFFVSEVNGILLGLLACSCTTAYIAFIVYLVSQSESREPMVWTADSSGLLWVSWAYRALLDLQYPSEHSVLSAIWKLNVAPKIKFFIWRIALNRVATGELEKEGYTYHRGRV 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00411 576 PANTHER BNAC08G04640D PROTEIN 18 510 - -
Gma04g00411 576 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 57 435 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma04g00411 576 Hamap Divalent metal cation transporter MntH [mntH]. 45 467 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma04g00411 576 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 18 510 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma04g00411 576 PRINTS Natural resistance-associated macrophage protein signature 349 368 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma04g00411 576 PRINTS Natural resistance-associated macrophage protein signature 242 265 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma04g00411 576 PRINTS Natural resistance-associated macrophage protein signature 193 214 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma04g00411 576 PRINTS Natural resistance-associated macrophage protein signature 377 394 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma04g00411 576 PRINTS Natural resistance-associated macrophage protein signature 168 187 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma04g00411 576 PRINTS Natural resistance-associated macrophage protein signature 138 164 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma04g00411 576 PRINTS Natural resistance-associated macrophage protein signature 411 430 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma04g00411 576 Coils Coil 6 26 - -
Gma04g00411 576 Pfam Natural resistance-associated macrophage protein 80 441 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00411 Gma-Chr4 3569626 3574487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00411 24 499 Inorganic Solute Cotransporters AT1G47240 82.809 0.0 809
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00411 K21398 - gmx:100791117 947.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00411 04 3569626 3574487 Gma04g00411 04 3569626 3574487 ECH
Gma04g00411 04 3569626 3574487 Gma06g00397 06 3421654 3425676 GST