Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00408 ATGGAGAAGCGAAGGCCAATGGTTGATTACATTGAGAATGTTCAGAAAGAGGTTACAACGATCATGAGAGCAATATTGGTGGATTGGATAGTAGAGGTTGCCGAAGAATACAAGCTTCTCTCTGATACCATTTTTCTCTCTGTTTCATATATCGATAGAGTTTTGTCTATTAATCCTGTCAGCAAGCCGAGGCTACAGTTACTGGGTATTTCTTCCATGTTCATTGCATCTAAGTATGAGGAAATTAGCCCGCCGCATGTGGAAGAATTCTGCTTTATCACTGACAACACGTATGACAAGACAGAGGTGGTGAGTATGGAGGCTGACATACTTAAGGCCCTGAATTTTGAATTGGGCAACCCCACTGTTAAGACCTTTTTAAGGAGGTTTACTGGAATTGCCTGTGAGAATAAAAAGGCTTCAAGTTTGCAATTTGAGTTTATGAGTTATTATCTTGCTGAGCTAAGTTTGTTGGAGTATTGTTGTTTGAAGTTCTTACCTTCTTTGGTGGCTGCATCTGTTGTATTTCTTGCCAGGTTTATCATTTGGCCTGATCTGCAACCTTGGACTTCAGACTTGTATGAATGCTCTCGGTATAAATCAGTTGAGTTAAAGGAGTGTGTTCTGGTCTTACATGACTTGTACACGGCAAGGAGGGGAGGGTCTTTCCAAGCTATTCGGGAGAAATACAAACAGCATAAGTTTAAGTACGTAGCAAACCTGTCTGCGCCCCAAGTAGAGCCAAACCAGAAGCCGAAGAAGGAAGATTCTGCAGTACATGGAATCCCAATCCCATGGTATCACGTAGAATAG 813 0.4182 MEKRRPMVDYIENVQKEVTTIMRAILVDWIVEVAEEYKLLSDTIFLSVSYIDRVLSINPVSKPRLQLLGISSMFIASKYEEISPPHVEEFCFITDNTYDKTEVVSMEADILKALNFELGNPTVKTFLRRFTGIACENKKASSLQFEFMSYYLAELSLLEYCCLKFLPSLVAASVVFLARFIIWPDLQPWTSDLYECSRYKSVELKECVLVLHDLYTARRGGSFQAIREKYKQHKFKYVANLSAPQVEPNQKPKKEDSAVHGIPIPWYHVE 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00408 270 PIRSF Cyclin_A_B_D_E 1 257 IPR039361 -
Gma04g00408 270 SUPERFAMILY Cyclin-like 121 244 IPR036915 -
Gma04g00408 270 PANTHER CYCLIN-A3-1-RELATED 2 249 - -
Gma04g00408 270 CDD CYCLIN 22 111 IPR013763 -
Gma04g00408 270 SUPERFAMILY Cyclin-like 4 118 IPR036915 -
Gma04g00408 270 Gene3D - 114 246 - -
Gma04g00408 270 Pfam Cyclin, C-terminal domain 121 243 IPR004367 -
Gma04g00408 270 Gene3D - 7 113 - -
Gma04g00408 270 Pfam Cyclin, N-terminal domain 3 118 IPR006671 -
Gma04g00408 270 PANTHER CYCLINS 2 249 IPR039361 -
Gma04g00408 270 CDD CYCLIN 121 212 IPR013763 -
Gma04g00408 270 SMART Cyclin_C_2 121 244 IPR004367 -
Gma04g00408 270 ProSitePatterns Cyclins signature. 23 54 IPR006671 -
Gma04g00408 270 SMART cyclin_7 125 213 IPR013763 -
Gma04g00408 270 SMART cyclin_7 28 112 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00408 Gma-Chr4 3550308 3554054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00408 3 241 Core Cell Cycle Gene Families AT5G43080 64.854 3.70e-111 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00408 K06627 - gmx:100776007 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00408 04 3550308 3554054 Gma04g00408 04 3550308 3554054 ECH
Gma04g00408 04 3550308 3554054 Gma06g00394 06 3401588 3403334 GST