Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00390 ATGCCGATTCATCCGCACTTATTACTCTTGCTACTACTGCTGCTTGCGTCCTCAAACGCCCACTGCTCCAAACTCCCCACCTTAGTTTTCACCGACGCAACCGCTCTCCTCGCCTTCAAACTAAAAGCCGACGTCAACGACCACCTTCACTTCTCCCCCCTCACGCGCGGCCTCCGCTTCTGCGCGTGGCAAGGCGTGGAATGCAACGGCCCCAAAGTGGTCCGTCTCGTTCTCCAAAACTTAGATCTCGGAGGCGCGTGGGCTCCCAACACACTCTCGCGTCTCGACCAGCTCCGCGTCCTCAGCTTGCAGAACAACTCACTCACCGGACCCTTACCTGACCTCACCGGTCTCTTCAATCTCAAAAGCCTCTTCCTCGATAACAACTACTTCACCGGTTCTCTCCCTCCCTCACTCTTCTCTCTCCACCGTCTCCGAAACTTGGATTTCTCCCACAACAACTTCTCCGGACCTATCTCCGCCGCGTTCACCTCCCTAGACCGCCTCCACAGCCTCCGTTTAAGCTTCAACTCTTTTAACGGTTCAATCCCTCCGTTTAACCAGTCCTCCCTAAAAGTCTTCGAAGTCTCCGGCAACAACCTCTCCGGCGCGGTTCCAGTGACTCCGACCCTGTTCCGTTTTCCGCCTTCCTCCTTCGCCTTCAACCCTAGCCTCTGCGGCGAAATCATCCGCGTGCAATGCCGTCCCGCACAGCCTTTCTTCGGACCCGCGGCGCCGCCCACGGCGGCGCTCGGCCAGAGCGCGCAGGTGCACGGCGTCAACGGCATAATCCGGCAGCCGTACGAGAAGAAGCGCCACGACCGGAGGGCGCTGATTATTGGCTTCTCGGCCGGAATATTCGTTCTGGTTTGCTCGCTGGTGTGCTTCGCGGCGGCGGTGAGGAAGCAGAGGAGCCGGAGCAAGAAGGACGGGAGGTCGGGGATTATGGCGGCGGATGAGGCGGCGACGGCGGAGGCTGCGGCGGTGATGCGGATGGAGATGGAGAGGGAGCTGGAGGAGAAAGTAAAGAGAGCGGAGGTGGCGAAGAGTGGGAGTTTAGTATTCTGTGCGGGTGAGGCGCAGGTGTATACGCTGGACCAGCTCATGAAGGGTTCAGCTGAACTTTTAGGGAGAGGGTGTTTGGGAACCACTTATAAGGCGGTTCTTGATAGCCGTCTGATGGTGACGGTGAAGCGCCTTGATGCGGGGAAAATGGCTTCGCATGCAACTAAGGAAGTGTTCGAGCGACACATGGAATCCGTTGGTGGCCTTCGACACCCCAATTTGGTTCCTCTTAGGGCTTATTTCCAGGCCAAGCACGAGAGGCTCATAATCTACGACTTTCAGCCCAATGGCAGCCTCTTCTCCCTCATACACGGTTCGAGATCAAGCAGGGCAAGGCCATTGCATTGGACATCGTGCTTAAAAATAGCAGAGGACGTAGCACAAGGTCTGGCCTTCATCCACCAGGCATGGAGACTGGTCCATGGCAATCTCAAGTCCTCCAATGTTCTCCTTGGACCAGATTTTGAGGCATGCATTACAGATTACTGCCTTTCTGTGTTGACACACCCATCCATATTTGATGAAGATGGGGATTCAGCAGCATACAGAGCTCCGGAGACTCGCAACCCCAATCATCACCCAACCCACAAATCCGATGTTTATGCGTATGGGATTTTGTTGCTTGAGCTTCTGACGGGGAAATTTCCCTCCGAGCTCCCATTCATGGTTCCTGGTGACATGTCAAGTTGGGTGAGGTCCATCAGGGATGACAATGGGAGCGAAGATAACCAAATGGACATGCTTCTTCAGGTGGCTACAACTTGTAGCTTGACCTCACCGGAGCAGAGGCCAACTATGTGGCAGGTCTTGAAGATGTTGCAGGAAATCAAAGAGATTGTACTATTGGAGGATAGTAGTGAATTGGACATACGCAGTAGTAATGCCATGCCTTAG 1959 0.5498 MPIHPHLLLLLLLLLASSNAHCSKLPTLVFTDATALLAFKLKADVNDHLHFSPLTRGLRFCAWQGVECNGPKVVRLVLQNLDLGGAWAPNTLSRLDQLRVLSLQNNSLTGPLPDLTGLFNLKSLFLDNNYFTGSLPPSLFSLHRLRNLDFSHNNFSGPISAAFTSLDRLHSLRLSFNSFNGSIPPFNQSSLKVFEVSGNNLSGAVPVTPTLFRFPPSSFAFNPSLCGEIIRVQCRPAQPFFGPAAPPTAALGQSAQVHGVNGIIRQPYEKKRHDRRALIIGFSAGIFVLVCSLVCFAAAVRKQRSRSKKDGRSGIMAADEAATAEAAAVMRMEMERELEEKVKRAEVAKSGSLVFCAGEAQVYTLDQLMKGSAELLGRGCLGTTYKAVLDSRLMVTVKRLDAGKMASHATKEVFERHMESVGGLRHPNLVPLRAYFQAKHERLIIYDFQPNGSLFSLIHGSRSSRARPLHWTSCLKIAEDVAQGLAFIHQAWRLVHGNLKSSNVLLGPDFEACITDYCLSVLTHPSIFDEDGDSAAYRAPETRNPNHHPTHKSDVYAYGILLLELLTGKFPSELPFMVPGDMSSWVRSIRDDNGSEDNQMDMLLQVATTCSLTSPEQRPTMWQVLKMLQEIKEIVLLEDSSELDIRSSNAMP 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00390 652 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 640 - -
Gma04g00390 652 Gene3D Ribonuclease Inhibitor 31 142 IPR032675 -
Gma04g00390 652 SUPERFAMILY Protein kinase-like (PK-like) 374 632 IPR011009 -
Gma04g00390 652 Pfam Protein kinase domain 374 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00390 652 ProSiteProfiles Protein kinase domain profile. 370 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00390 652 Gene3D Phosphorylase Kinase; domain 1 332 448 - -
Gma04g00390 652 Gene3D Ribonuclease Inhibitor 143 227 IPR032675 -
Gma04g00390 652 SUPERFAMILY L domain-like 30 207 - -
Gma04g00390 652 Pfam Leucine rich repeat 120 178 IPR001611 GO:0005515
Gma04g00390 652 Gene3D Transferase(Phosphotransferase) domain 1 450 644 - -
Gma04g00390 652 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 6 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00390 Gma-Chr4 3368343 3371624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00390 1 650 Receptor kinase-like Gene Family AT5G43020 55.672 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma04g00390 Pkinase 9.5e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00390 - - gmx:100817172 1260.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00390 04 3368343 3371624 Gma04g00390 04 3368343 3371624 ECH
Gma04g00390 04 3368343 3371624 Gma06g00381 06 3282644 3285242 GST