Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00380 ATGAGTGCCCCTGCCGTTCGACGCATTTCAGAATGTTTTGTTAAGCCCCAGCTCCCCAACCAAGTTTCAAACCAGATCTGCAATTTAACACATTGGGATATTGCTATGTTGTCTACCAACTATATCCAGAAGGGTCTACTCTTCAAGAAGCCTGCAACAACTCTTGTTGATCAACACCATTTCATGGAGAATCTGTTGGAGAAGCTCAAACACTCTCTTTCTCTCACCCTCTTCCATTTCTATCCTTTGGCTGGTCGCCTTGTCACCCACCAAACCCATGACCCTCCCTCTTATTCTGTTTCCGTTGATTGCAAAAACAGTGATGGAGCTAGATTCATTTATGCAACTTCGGACATCACTATATCTGACATACTCGCCCCCATTGACGTCCCACCCATTCTTCACTCCTTCTTTGACCATCACAAAGCAGTCAACCATGATGGCCACACCATGTCCCTTTTGTCCATCCAAGTCACTGAACTTGTGGATGCTGTTTTCATAGGTTGTTCCATGAACCACGTTGTTGGCGATGGCACTTCTTATTGGAATTTCTTCAATACATGGTCTCAGATCTTTCAATCTCAATCTCATGCTCTAGGCCATGAATATGATGTTCCCATTCACAATCGCTGGTTTCCAAAAGATTGCGCTCCACCAATCAATCTTCCTTTCATACATCATGATGAGATTATAAGCAGATATGAAGCACCCAAGCTGAGAGAGAGAATCTTCCACTTTTCAGCAGAGTCTATTGCAAAACTGAAAGCAAAGGCAAACTCGGAGTCCAATACCACCAAAATCTCTTCGTTCCAATCATTATCAGCGCTTGTTTGGAGATCCGTAACACGTGCACGCTCCCCACCGAACGACCAGAGAACAACTTGCAGGTTGGCAGCAAACAATCGATCAAGAATGGAACCGCCTCTGCCTCAGGAATACTTTGGAAACTCAGTTCATGTAGTGAGTGCAGAAACGACGACAGGGGAATTGCTTGAGAATGGTATAGGATGGGCTGCATGGAAGTTGCACATGGCTGTTGCAAACTATAACAATGGAGTGGTGCTGCAATCTCTGAAGGTGTGGTTAGAGTCTCCTTTCGTAATTCAAATGGGTCGTTTCTTTGACCCCTACTGTGTGATGATGGGTAGCTCGCCCAGGTTCAACGTGTATGGAAATGAATTTGGAATGGGAAAAGCGGTGGCGGCAAGAAGTGGTTATGCCAACAAGTTTGAGGGGAAAGTGACATCATACCCAGGCCGTGAAGGAGGTGGAAGCATTGATTTGGAAGTGTGCCTTTCACCAGAAAATATGACCGCGCTGGAATCAGATGAAGAGTTCATGAATGCTGTTTCTAAGTCCAATCCTTTGTACGAGTTGACTAATGTGGCTTGTCCTGGACCGTCTTTCTAA 1410 0.4518 MSAPAVRRISECFVKPQLPNQVSNQICNLTHWDIAMLSTNYIQKGLLFKKPATTLVDQHHFMENLLEKLKHSLSLTLFHFYPLAGRLVTHQTHDPPSYSVSVDCKNSDGARFIYATSDITISDILAPIDVPPILHSFFDHHKAVNHDGHTMSLLSIQVTELVDAVFIGCSMNHVVGDGTSYWNFFNTWSQIFQSQSHALGHEYDVPIHNRWFPKDCAPPINLPFIHHDEIISRYEAPKLRERIFHFSAESIAKLKAKANSESNTTKISSFQSLSALVWRSVTRARSPPNDQRTTCRLAANNRSRMEPPLPQEYFGNSVHVVSAETTTGELLENGIGWAAWKLHMAVANYNNGVVLQSLKVWLESPFVIQMGRFFDPYCVMMGSSPRFNVYGNEFGMGKAVAARSGYANKFEGKVTSYPGREGGGSIDLEVCLSPENMTALESDEEFMNAVSKSNPLYELTNVACPGPSF 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00380 469 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 450 - -
Gma04g00380 469 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 450 - -
Gma04g00380 469 Gene3D - 230 442 IPR023213 -
Gma04g00380 469 Pfam Transferase family 9 447 - -
Gma04g00380 469 Gene3D - 8 220 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00380 Gma-Chr4 3266869 3268930 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00380 67 441 Monolignol Biosynthesis Gene Families AT5G48930 28.788 4.00e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00380 - - gmx:100789881 969.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00380 04 3266869 3268930 Gma04g00380 04 3266869 3268930 ECH
Gma04g00380 04 3266869 3268930 Gma06g00373 06 3178697 3180103 GST