Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00379 ATGATGAATTCTCGTGTCGTTCGAAGTGTTTCAGAATGTTTTATCAAACCGTTGGGCCAAGCTAAAGAGTCAAACCTAATATGTCATTTAACACCATGGGATATTGCTATGATGTCTTTGCACTACATCCAGAAAGGTCTACTCTTCAAGAAGCCTGCAACACTTGTTGATCCACAAGATTTCATGGAGAATCTGTTAGAGAAGCTGAAACACTCTCTTTCTCTCACCCTCTTCCATTTCTATCCTTTGGCAGGCCAACTTGTCACCCAAAAAACCCAAGACCCTCCCTCTTATACTATTTTTGTCGATTGCAACAACACTAGTGGAGCCAGATTCATCTATGCAACTTTGGATATCACTATATCTGACATACTCTCCCCAATTGATGTCCCACCCATTGTTCACTCATTCTTTGACCATCACAAAGCAGTCAACCATGATGGCCACACCATGCCACTGTTGTCCATCCAAGTCACTGAACTATTGGAtggtgttttcataggctgttccatgaaccataccataggtgatggcacttcttattggaatttctttaacacatggtctgagatCTTTTTTCAAACTCAAGCTCAAGGGCTTGAATATGATGCTACTGTTCCCATTTCACGCCACCCTATTCATAATAGGTGGTTTCCAGATGGTTGTGGTCCATTAATCAATCTTCCCTTCAAACATGAGGACGAGTTTATTGACAGATTTGAATCACCAAAGCTGAGAGTGAGAATCTTCCACTTTTCAGCAGAGTCTATTGCAAAGCTGAAAGCAAGGGCTAACTCTGAGTCCAAATCCAAAACCAGCGAAATCTCTTCGTTCCAATCCTTATCAGCGCATGTTTGGAGATCCGTAACACGAGCACGGAAGCTGCCAAATGATGAGATAACAAGTTGCAAATTGGCCATAAGCAATCGATCAAGATTGGAACCGCCTCTTCCACACGAGTACTTTGGAAACGCAGTTGATGTGGTGAGCACTGCAGGGTTCACGGCAGGGGAATTGCTTGAGAAGGATCTAGGATGGGCAGCATGGAAGGTGCACGTGGCTGTTGCGAACCAAAACGACAAAGCGGTGAGACAAAAGCTCAAAGAGTGGTTGAAGCTTCCTGTGGTGTACCAACTTGGTGTGCACTTTGATCCTTGTACTGTGACCATGTCGAGTTCCCCGAGGTTCAACATGTATGGGAATGAATTTGGGATGGGGAAAGCGGTTGCAGTTCTGAGTGGATATGCCAACAAAAATGATGGGAACGTGACAGCATACCAAGGATATGAAGGAGAGGGAAGCATAGATTTGGAAATTTGCCTTTCGCCTGATGCAGTGAGCGCGCTGGAATCAGATGAGGAGTTTATGGAAGCTGCTTCTGTGGCCAATTTCCTACACTAG 1401 0.4197 MMNSRVVRSVSECFIKPLGQAKESNLICHLTPWDIAMMSLHYIQKGLLFKKPATLVDPQDFMENLLEKLKHSLSLTLFHFYPLAGQLVTQKTQDPPSYTIFVDCNNTSGARFIYATLDITISDILSPIDVPPIVHSFFDHHKAVNHDGHTMPLLSIQVTELLDGVFIGCSMNHTIGDGTSYWNFFNTWSEIFFQTQAQGLEYDATVPISRHPIHNRWFPDGCGPLINLPFKHEDEFIDRFESPKLRVRIFHFSAESIAKLKARANSESKSKTSEISSFQSLSAHVWRSVTRARKLPNDEITSCKLAISNRSRLEPPLPHEYFGNAVDVVSTAGFTAGELLEKDLGWAAWKVHVAVANQNDKAVRQKLKEWLKLPVVYQLGVHFDPCTVTMSSSPRFNMYGNEFGMGKAVAVLSGYANKNDGNVTAYQGYEGEGSIDLEICLSPDAVSALESDEEFMEAASVANFLH 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00379 466 Gene3D - 2 224 IPR023213 -
Gma04g00379 466 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 459 - -
Gma04g00379 466 Pfam Transferase family 14 456 - -
Gma04g00379 466 Gene3D - 233 451 IPR023213 -
Gma04g00379 466 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00379 Gma-Chr4 3260350 3262560 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00379 67 450 Monolignol Biosynthesis Gene Families AT5G48930 29.829 4.46e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00379 - - gmx:100788297 949.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00379 04 3260350 3262560 Gma04g00379 04 3260350 3262560 ECH