Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00378 ATGAGTACTCCTCCAGTTGTTGAGCGCGTTTCAGAATGCTTCATCAAGCCGCAGCACTCCAACCATGAATCAAACCAAATCTGCTACTTAACACCTTGGGATATTGCTATGTTGTCTGCTCACTATATCCAAAAGGGCCTTCTCTTCAAGAAGCCCTCATCACCACTTGTTAGTCACAATAATTTCATAGAGAACCTGTTGCAGAAGCTCAAGCACTCTCTTTCTCTCACCCTCTTCCATTTCTATCCTTTGGCTGGTCGCCTTGTCACCCACCAAACCCATGACCCTCCCTTCTATGCTGTTTTCGTTGATTGCAACAACAGTGATGGAGCCAGATTCATCCATGCAACTTTAGATATGACCATATCTGATATCCTCTCTCCCGTTGACGTTCCACCCATTGTTCAATCATTGTTTGACCACCACAAAGCTGTCAACCATGACGGTCACACAATGCCGTTGTTGTCCGTCCAAGTCACTGAATTTGTGGATGGTGTTTTCATAGGTTGTTCCATGAACCACACTCTTGGTGATGGCACTTCTTATTGGAATTTCTTCAACACATGGTCTCAGATCTTTCAAGTTCAAGGCCATGAACATGATGTTCCCATTTCGCACCCACCCATTCACAATCGCTGGTTTCCAGAGGGTTGCGGTCCATTAATCAACCTTCCCTTCAAACATCACGACGATTTTATAAACAGATATGAAACACCGTTGCTGAGAGAGAGAATCTTCCACTTCTCAGCAGAGTCTATTGCAAAACTGAAAGCAAAGGCTAACTCGGAGTGCAACACAACCAAAATCTCATCGTTCCAATCATTATCGGCACTTGTTTGGAGATGCATAACTCGTGCGCGGCGCTTGCCGTATGATCAAAGAACAAGTTGCAAGTTGTCCGCAAACAACAGAACAAGAATGGAACCACCACTGCCTCAGGAGTACTTTGGAAACTCAATTTATACACTGAATGCAGGAACCGCCACCTCAGGGAAATTGCTTGAGAATGGTATAGGTTGGGCAGCATGGAAGTTGCACAAATCGGTTGTAAACCATAACGACAGAGCGGTGTTGGAAACGCTCAAAGAGTGGTTAGAGAGTCCTCTGATATATGATCTTGGTCGTTATTTTGACCCGTACTGTGTGATGATGGGTAGCTCACCCAGGTTCAACATGTATGGGAATGAGTTTGGAATGGGAAAGGCAGTTGCACTTAGAAGTGGGTATGCCAACAAATTTGATGGAAAAGTAACATCATACCCAGGCCATGAAGGAGGAGGAAGCGTAGATTTGGAAGTGTGTCTTTCGCCAGCTGTAATGAGTGCACTGGAATCGGACGAGGAGTTCATGAATATTGCTCTAGTTTCTGTTTACAATCCTCTCTAG 1386 0.4481 MSTPPVVERVSECFIKPQHSNHESNQICYLTPWDIAMLSAHYIQKGLLFKKPSSPLVSHNNFIENLLQKLKHSLSLTLFHFYPLAGRLVTHQTHDPPFYAVFVDCNNSDGARFIHATLDMTISDILSPVDVPPIVQSLFDHHKAVNHDGHTMPLLSVQVTEFVDGVFIGCSMNHTLGDGTSYWNFFNTWSQIFQVQGHEHDVPISHPPIHNRWFPEGCGPLINLPFKHHDDFINRYETPLLRERIFHFSAESIAKLKAKANSECNTTKISSFQSLSALVWRCITRARRLPYDQRTSCKLSANNRTRMEPPLPQEYFGNSIYTLNAGTATSGKLLENGIGWAAWKLHKSVVNHNDRAVLETLKEWLESPLIYDLGRYFDPYCVMMGSSPRFNMYGNEFGMGKAVALRSGYANKFDGKVTSYPGHEGGGSVDLEVCLSPAVMSALESDEEFMNIALVSVYNPL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00378 461 Pfam Transferase family 7 450 - -
Gma04g00378 461 Gene3D - 8 220 IPR023213 -
Gma04g00378 461 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 453 - -
Gma04g00378 461 Gene3D - 233 445 IPR023213 -
Gma04g00378 461 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00378 Gma-Chr4 3253107 3254492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00378 68 444 Monolignol Biosynthesis Gene Families AT5G48930 29.442 2.51e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00378 - - gmx:100787228 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00378 04 3253107 3254492 Gma04g00378 04 3253107 3254492 ECH
Gma04g00378 04 3253107 3254492 Gma06g00372 06 3177469 3177789 GST