Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00365 ATGCTTGGGGTCTTCGGAATTCTGGTGACAGATCTACTTCGCGTCACAGGAATTAACAAGATACCAGTTTGGTTTGAAGCTGGTGCAGTAAAGTACGACTTTGCCAATACAAAGACACTCTTCCTTGTTCAACTACTTCTGATGGGGTTTGTGGAAACAAAAAGGTACATGGATTTTGTTAGTCCTGGATCTCAAGCTAAAGAGGGGTCTTTCTTTGGATTGGAAGCTTCACTGAAAGGCTTAGAGCCAGGCAGTACATGTCAGAGAGTGGCAGAGGTGCCATGGGAGACTCCGGGAGGGAGAGTGCAGAGAAGAAGGGAGGGAGGTAAAGTTTTGATGTGGGAAGGTGCACAATAA 357 0.4622 MLGVFGILVTDLLRVTGINKIPVWFEAGAVKYDFANTKTLFLVQLLLMGFVETKRYMDFVSPGSQAKEGSFFGLEASLKGLEPGSTCQRVAEVPWETPGGRVQRRREGGKVLMWEGAQ 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00365 118 Pfam Chlorophyll A-B binding protein 1 76 IPR022796 -
Gma04g00365 118 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 100 IPR001344 GO:0009765|GO:0016020
Gma04g00365 118 Gene3D Chlorophyll a/b binding protein domain 1 92 - -
Gma04g00365 118 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 5, CHLOROPLASTIC 1 100 - -
Gma04g00365 118 SUPERFAMILY Chlorophyll a-b binding protein 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00365 Gma-Chr4 3120825 3122776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00365 1 71 Chloroplast and Mitochondria Gene Families AT3G61470 39.437 1.01e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00365 K08911 - gmx:100804934 166.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00365 04 3120825 3122776 Gma04g00365 04 3120825 3122776 ECH
Gma04g00365 04 3120825 3122776 Gma06g00356 06 3054737 3056559 GST