Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00357 ATGACGGATGAGTGCGGTTTGGAGACAACGTTGGAGAAGCACGAGACTTATGATAAGCACAGGGATTATGCGAATCGAGTGTATGCTTCAGATGAGGTCAGAGAGAAAGCAGAAAAGTTAATGTCCGGTTTAGATTCTGAATATCCAACCTTCATAAAGTCAATGCTACAAAAATTGTTAGATCTATTCAAGTTACTGTGTTTTGATAATCATGGTTGCTTTCTTATCTATTTTGAATTTTGTGCCAATCTGAACGAGGTAAAAGGGGTGCAAAGTGTATATAAAACTAATACAAGAATGGGGGGCCTTCCAGTCCACTTCTGCAACAGTCTTCCAAAAAAGGACGAAGTGGTGACTTTGGTTGATGAGGATGGGATTGAGTATTCGACAATATATTTGGCAGGAAAAACAGGACTTAGTGGTGGATGGAGAGGTTTTGCAATTGCTCATGACCTAACTGATGGGGACGCTTTAATTTTTCAATTAATTAAGCGCACCACATTCAAGGTGTACATTGTTAGAGCAGATTGTCCTCCAGAGGATAAACAGCTTGAGTGA 558 0.3996 MTDECGLETTLEKHETYDKHRDYANRVYASDEVREKAEKLMSGLDSEYPTFIKSMLQKLLDLFKLLCFDNHGCFLIYFEFCANLNEVKGVQSVYKTNTRMGGLPVHFCNSLPKKDEVVTLVDEDGIEYSTIYLAGKTGLSGGWRGFAIAHDLTDGDALIFQLIKRTTFKVYIVRADCPPEDKQLE 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00357 185 Gene3D - 29 176 IPR015300 -
Gma04g00357 185 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 13 181 IPR044837 -
Gma04g00357 185 ProSiteProfiles B3 DNA-binding domain profile. 86 176 IPR003340 GO:0003677
Gma04g00357 185 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS03G0184500 13 181 - -
Gma04g00357 185 SUPERFAMILY DNA-binding pseudobarrel domain 100 176 IPR015300 -
Gma04g00357 185 CDD B3_DNA 103 174 IPR003340 GO:0003677
Gma04g00357 185 SMART B3_2 94 176 IPR003340 GO:0003677
Gma04g00357 185 Pfam B3 DNA binding domain 96 175 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00357 Gma-Chr4 3057129 3060482 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00357 4 176 B3 DNA Binding Superfamily AT3G19184 43.820 2.10e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gma04g00357 B3 3.8e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00357 - - gmx:100794327 206.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00357 04 3057129 3060482 Gma04g00357 04 3057129 3060482 ECH
Gma04g00357 04 3057129 3060482 Gma06g00345 06 2996545 3000246 GST