Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00335 ATGTACACTACTTCGCATACAGAAATGCCAACCTTTGCACCCTTGCCAGAGCCAGATCTCTCCTTAAACATAAGCCCACCCTTCACTTCAGATTCTGACGCCAAAAAAGTGGAAATAAGCTGCAACGGATTATTAACATTAACTACAAAAACGCTTTACAACGATATGTGCTCAACCTCGGATTCTGGTAGCAGTGGAAGCGATTTAAGCCACGAAAATGGTTTTTTCGGCCACACGGACACTGCCTACAACCTTGGCCATCATGAACCGACATTGAGCTTAGGCATCGAAACGACAAATTCGAATCCTTATCCTGTCCAACAAGGAGCACTCTCGAGAAACAACTTCAGTCACTTCCACAACTACCAACCTCACAGCAATACTCTGGATTTCAAGCGAAATGCTAGAGTCATTCATGGCGTGAAAAGAAACGCCAGAGCTCCTAGAATGCGATGGACTACGACCCTCCATGCTCATTTTGTTCATGCGGTTCAGCTTCTTGGTGGTCATGAAAGGGCAACTCCGAAGTCAGTGTTAGAGTTGATGAATGTTAAAGATCTAACTCTATCTCACGTGAAGAGTCACTTGCAGCAATATGATTCTATCGGTGGTGAAATTGCAGGATATGGGCAGACAGGTATAGGGTTGAGCCAAAAGCCAGGAATTGTCGATCTGTATGGAGTCTTAGCTTGTGAGAGAGCCAATTTGCCACAGCCGCTGCTAAAATCCCAAAGGGCGTCATGGCAATCATCAATAGAGACAAATTCAATAAATTATACACAGAACCCCATAATCAATTCGATGTATTCTCATCTCAAAGGAAACCAAACCATGGTGGGTGGACAGCATTATGAATGTCTGTCAAATTGCATGAAGGAGAAATTGGATTCTTGCTCTTTGTCACGTTCCGATATGACGCTTGACCTAGAATTTACCCTTGGAAGaagggtggtcacctatcaaatttccaatatgattcggataccagcatcaaatccacatgcctgGCTCTTATACTTGGTGGAAGTGATACCACAGCTGGCACGGTTACTTGGGCCATCTCATTACTGCTCAACAATCGCcaagcattaa 1092 0.413 MYTTSHTEMPTFAPLPEPDLSLNISPPFTSDSDAKKVEISCNGLLTLTTKTLYNDMCSTSDSGSSGSDLSHENGFFGHTDTAYNLGHHEPTLSLGIETTNSNPYPVQQGALSRNNFSHFHNYQPHSNTLDFKRNARVIHGVKRNARAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLSHVKSHLQQYDSIGGEIAGYGQTGIGLSQKPGIVDLYGVLACERANLPQPLLKSQRASWQSSIETNSINYTQNPIINSMYSHLKGNQTMVGGQHYECLSNCMKEKLDSCSLSRSDMTLDLEFTLGRRVVTYQISNMIRIPASNPHAWLLYLVEVIPQLARLLGPSHYCSTIAKH 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00335 363 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 315 - -
Gma04g00335 363 Gene3D - 147 201 - -
Gma04g00335 363 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 315 IPR044847 GO:0000976|GO:0006355|GO:0010158
Gma04g00335 363 SUPERFAMILY Homeodomain-like 146 200 IPR009057 -
Gma04g00335 363 Pfam Myb-like DNA-binding domain 149 199 IPR001005 -
Gma04g00335 363 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 148 199 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00335 Gma-Chr4 2862401 2868610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00335 71 219 G2-like Transcription Factor Family AT5G42630 50.000 3.56e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gma04g00335 Myb_DNA-binding 1.7e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00335 - - gmx:100804354 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00335 04 2862401 2868610 Gma04g00335 04 2862401 2868610 ECH
Gma04g00335 04 2862401 2868610 Gma06g00321 06 2789121 2791664 GST
Gma17g02357 17 41583495 41588197 Gma04g00335 04 2862401 2868610 PCT
Gma14g00683 14 6732921 6737644 Gma04g00335 04 2862401 2868610 PCT
Gma04g00335 04 2862401 2868610 Gma17g02357 17 41583495 41588197 PCT
Gma04g00335 04 2862401 2868610 Gma14g00683 14 6732921 6737644 PCT