Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00332 ATGATCACTAAACAAAAACAAGAACAACTTCTCTTGTTCCTGATCTTAGTTTTGGGGAAAATAGCATTTTTCATTATTCCAACAACGAATGGCCAAGTGAACCACCACCGCCAGTGCCGCCAAACATGCGGTTCCTCCAAACCCGTCCCTTACCCATTCGGATTCTCCTCCGGCTGCGCAATCCGCCTGAACTGCACCGCCGGCGTGGCCTCCGTCGGAGAATTCCCGGTCAAAGTCAACACAGACAGCTTGATCGTGAGCATCGAAGCCCAATGCAATCGCTCATTCGATAGCTTCCACCATCTGTTCAGCCACAAATATGCACCCACTTCGCGAAACGTGATCCTCTTAGACAACTGCACCGCTACGCCTTTACCCTGCTCCATTCCGGAGACTCTGGTGCGGACCCACTTCGAATCCGTGGGCTGTGGCAACGCCTCCGGCACCGGCGAATTGAGCTGCTACTTCGAGAAAATAACCAACGGATTCATGGATCAGAGAATGTTGGATGAAATCCGGTGCAAGTACTTTATGTCGTCCCTTTCAGTGCCAGATATCAAAAACATTTCGGGTACTGCGCCTTTGTCTTTGGGTGTAAATGTAATCGAACTTGGATGGTGGCTTCAGGGAGATCGATGTTTATGTTCTGATCACGCCAATTGTACCACGCTTCAGTCGCCGGTGGACAGAAAACCAGGGTTCCGGTGTCGCTGCCGTGACGGGTTCGTCGGCGATGGGTTTTTGGTCGGAACTGGTTGCCAGAAAGCCTCGTCATGCAACCCAGCGAAGTACATGTCTGGTCGATGTGGAGGAACAACGAGATTCATAGTCTTAATTGGTGGGTTTGTTATTGGCGTTTCACTGATGGTTACTTTGGGTTCACTATGTTGTTTCTACCGCCGACGCTCCAAATTGAGAGTGACAAAGAGCACGAAAAGGCGTTTAACCGAAGCCACTGGCAACAATAGTGTTCCTATCTATCCCTACAAAGACATTGAGAAAGCCACGAATAGTTTCTCAGAGAAGCAACGGCTTGGAACTGGAGCATACGGGACTGTTTATGCTGGGAAACTCTACAACGATGAATGGGTTGCCATCAAAAGGATAAAACACAGAGACACTGACAGTATTGAGCAAGTAATGAACGAGATCAAGCTCCTTTCTTCAGTGAGCCACACCAATTTAGTTCGTTTGTTGGGTTGCTCCATTGAATACGGAGAACAAATCCTAGTGTACGAGTTCATGCCCAATGGAACACGGAGTCAGCATTTGCAGAAGGAGAGAGGGAGTGGTCTTCCTTGGCCAGTTCGACTCACGATTGCCACTGAAACTGCACAAGCCATAGCACATCTTCATTCAGCCATTTGTCCCCCCATTTACCACAGGGACATCAAGTCCAGTAACATACTCTTGGACTACAATTTCAGGTCCAAAGTTGCAGATTTTGGTCTTTCTAGACTTGGGATGACCGAAATATCCCACATTTCGACAGCCCCACAAGGAACCCCCGGCTACGTTGATCCACAGTACCATCAAGACTTTCACCTCTCTGACAAGAGCGACGTGTATAGCTTGGGTGTTGTTCTTGTTGAGATCATAACGGGACAGAAAGTGGTGGACTTTTCACGCCCACATAACGAAGTGAACCTGGCTTCTCTTGCTGCGGATAGGATCGGGAAAGGGCTTTTAAATGAGATTATAGACCCATTCCTTGAAGCCGAAGCAAGAAGTGACGCATGGACTCTTTCCTCCATACACAAGGTGGCTGAGCTTGCATTCAGATGCCTTGCGTTCCATAGGGACATGAGGCCTTCGATGACAGAAGTGGCTTCAGAGTTAGAGCAACTTAGTTTGAGTAGGTGGACAACAATGGGAGACAACAATTGTGCAACCTCAACGGAATTGTCCTCTTGCTCTTCCTCCTCAAATGAAAGTGAGAAACCACTAAGCACCGGAATGAAGAATGCTGGAGGGGCAAAGGGTAAAGGCCACCTCAAGCTCCAAACTGGGCCTGTTCATTTAATGTCATTACAAAGGCCCAATAGTAACTCACCGGTCTCGGTGCAAGACCAAGAGCTGTGGTTGAGTGAGCAGAGTTCTCCTTCATCGAATAGTTTTCCAAGCAAGTCATTTGATTGA 2139 0.4825 MITKQKQEQLLLFLILVLGKIAFFIIPTTNGQVNHHRQCRQTCGSSKPVPYPFGFSSGCAIRLNCTAGVASVGEFPVKVNTDSLIVSIEAQCNRSFDSFHHLFSHKYAPTSRNVILLDNCTATPLPCSIPETLVRTHFESVGCGNASGTGELSCYFEKITNGFMDQRMLDEIRCKYFMSSLSVPDIKNISGTAPLSLGVNVIELGWWLQGDRCLCSDHANCTTLQSPVDRKPGFRCRCRDGFVGDGFLVGTGCQKASSCNPAKYMSGRCGGTTRFIVLIGGFVIGVSLMVTLGSLCCFYRRRSKLRVTKSTKRRLTEATGNNSVPIYPYKDIEKATNSFSEKQRLGTGAYGTVYAGKLYNDEWVAIKRIKHRDTDSIEQVMNEIKLLSSVSHTNLVRLLGCSIEYGEQILVYEFMPNGTRSQHLQKERGSGLPWPVRLTIATETAQAIAHLHSAICPPIYHRDIKSSNILLDYNFRSKVADFGLSRLGMTEISHISTAPQGTPGYVDPQYHQDFHLSDKSDVYSLGVVLVEIITGQKVVDFSRPHNEVNLASLAADRIGKGLLNEIIDPFLEAEARSDAWTLSSIHKVAELAFRCLAFHRDMRPSMTEVASELEQLSLSRWTTMGDNNCATSTELSSCSSSSNESEKPLSTGMKNAGGAKGKGHLKLQTGPVHLMSLQRPNSNSPVSVQDQELWLSEQSSPSSNSFPSKSFD 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00332 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Gma04g00332 712 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 29 655 IPR045274 GO:0007166
Gma04g00332 712 Pfam Protein kinase domain 339 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00332 712 ProSiteProfiles Protein kinase domain profile. 339 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00332 712 SMART serkin_6 339 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00332 712 Gene3D Phosphorylase Kinase; domain 1 300 414 - -
Gma04g00332 712 SUPERFAMILY Protein kinase-like (PK-like) 317 614 IPR011009 -
Gma04g00332 712 MobiDBLite consensus disorder prediction 632 650 - -
Gma04g00332 712 MobiDBLite consensus disorder prediction 674 712 - -
Gma04g00332 712 Gene3D Transferase(Phosphotransferase) domain 1 415 634 - -
Gma04g00332 712 MobiDBLite consensus disorder prediction 632 712 - -
Gma04g00332 712 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Gma04g00332 712 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 29 655 - -
Gma04g00332 712 Gene3D Laminin 214 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00332 Gma-Chr4 2841844 2847791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00332 1 706 Receptor kinase-like Gene Family AT2G23450 50.276 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gma04g00332 Pkinase 8.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00332 - - gmx:100809858 1353.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00332 04 2841844 2847791 Gma04g00332 04 2841844 2847791 ECH
Gma04g00332 04 2841844 2847791 Gma06g00317 06 2756032 2761896 GST