Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00296 ATGGGTTGGACACGGGAAGAGAATAGACGTTTTGAGGATGCTCTTGCGGTTCATGGGCCTAATGACCCAAATCGGTGGCAACATGTAGCCAACGCCGTGGGTGGAAAATCCGTACAAGAGGTGAAAATGCACTATGAGATCCTCCAGGAAGATGTCATTCGAATAGAGCGTGATCAAATCCCACTTCCCAGCTACAGAGGTGCTGCTATCAACATCAACGCAAGACAGAATATTGACAATGAGCAAAGGCGAATGAGGAATCTAAGTCTCCGGTGA 276 0.4783 MGWTREENRRFEDALAVHGPNDPNRWQHVANAVGGKSVQEVKMHYEILQEDVIRIERDQIPLPSYRGAAININARQNIDNEQRRMRNLSLR 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00296 91 Coils Coil 71 91 - -
Gma04g00296 91 Pfam Myb-like DNA-binding domain 3 45 IPR001005 -
Gma04g00296 91 ProSiteProfiles SANT domain profile. 1 53 IPR017884 -
Gma04g00296 91 ProSiteProfiles Myb-like domain profile. 1 49 IPR001005 -
Gma04g00296 91 SMART sant 3 51 IPR001005 -
Gma04g00296 91 CDD SANT 3 45 IPR001005 -
Gma04g00296 91 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Gma04g00296 91 SUPERFAMILY Homeodomain-like 3 56 IPR009057 -
Gma04g00296 91 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 66 - -
Gma04g00296 91 Gene3D - 2 50 - -
Gma04g00296 91 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 66 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00296 Gma-Chr4 2547364 2549110 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma04g00296 Myb_DNA-binding 8.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00296 - - gmx:100789698 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00296 04 2547364 2549110 Gma06g00282 06 2475742 2478903 GST