Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00280 ATGGCGACTCCTGTTGAGCCTCCTAACGGGATCAGAACTGAAGGGAAGCATTATTATTCCATGTGGCAAACCCTGTTTGAGTTTGATTCAAAATACGTGCCCATCAAGCCAATTGGCCGCGGAGCATATGGGATTGTGTGCTCTTCTGTGAATAGAGAGACAAATGAGAAGGTTGCCATCAAGAAGATACAGAATGCCTTTGAAAACCGGGTTGATGCACTGAGGACTTTGCGCGAACTCAAGCTTCTTCGCCACCTTCACCATGAGAATGTGATTGCTTTGAAGGATATCATGATGCCTGTTCATAGGAATAGTTTCAAGGATGTCTATCTAGTTTATGAACTCATGGACACGGATTTGCATCAGATTATTAAGTCTTCTCAAGCTTTGTCTAATGATCACTGCCAGTATTTCCTCTTTCAGTTGCTCCGTGGCTTGAAATATCTTCACTCAGCTAACATCCTTCATCGTGACTTGAAACCTGGGAATCTTCTAATTAATGCAAATTGTGACCTAAAAATATGCGATTTTGGGTTAGCACGTACTAACTGCAGCAAGAACCAGTTCATGACCGAGTATGTTGTCACTCGGTGGTATAGGGCACCAGAGCTCCTACTCTGCTGTGACAACTATGGGACATCTATTGATGTTTGGTCAGTTGGATGCATCTTTGCAGAGCTTCTTGGCCGAAAACCGATTTTCCCTGGTTCAGAGTGTCTCAACCAGCTGAAGTTGATTATCAATATCCTTGGTAGTCAGAGGGAGGAGGATATTGAATTCATTGATAATCCAAAGGCAAAGAAGTATATCAAATCACTTCCTTATTCTCCTGGAAgccccttttcgcgactttatcctaatgcgcatccattagcaattgatcttcttgcaaagatgcttgtttttgatccaaccaagaggattagtgtcactgaagcacttcaacacccttaCATGGCCCCTCTGTATGATCCTAACTGTGACCCTCCAGCTGTCATTCCAATTGATCTTGACATTGATGAGGATCTAGGGGAAGAGATGATAAGGGAGATGATGTGGAAAGAAATGCTTCATTACCATCCCGAATCTGCGATGGAGAAT 1101 0.3851 MATPVEPPNGIRTEGKHYYSMWQTLFEFDSKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIQNAFENRVDALRTLRELKLLRHLHHENVIALKDIMMPVHRNSFKDVYLVYELMDTDLHQIIKSSQALSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNCSKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGSECLNQLKLIINILGSQREEDIEFIDNPKAKKYIKSLPYSPGSPFSRLYPNAHPLAIDLLAKMLVFDPTKRISVTEALQHPYMAPLYDPNCDPPAVIPIDLDIDEDLGEEMIREMMWKEMLHYHPESAMEN 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00280 367 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Gma04g00280 367 CDD STKc_TEY_MAPK 26 361 - -
Gma04g00280 367 Pfam Protein kinase domain 33 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00280 367 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 364 - -
Gma04g00280 367 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 364 - -
Gma04g00280 367 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Gma04g00280 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Gma04g00280 367 SUPERFAMILY Protein kinase-like (PK-like) 24 326 IPR011009 -
Gma04g00280 367 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gma04g00280 367 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00280 367 Gene3D Phosphorylase Kinase; domain 1 19 355 - -
Gma04g00280 367 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00280 Gma-Chr4 2439067 2440642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00280 1 367 MAP Kinase Gene Family AT1G10210 85.559 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gma04g00280 Pkinase 1.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00280 K20535 - gmx:100798863 743.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00280 04 2439067 2440642 Gma04g00280 04 2439067 2440642 ECH