Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00279 ATGTCCATGTCCATGGCCTCATCAAGTGGAAACTCCTCTATTAGCACAAAATCTCAGAGCTCAGGGTCTGAGGGTGATTTGCAGGTCGTGATAACAGACGAGAGGAAGAACAAGAGGAAGCAATCGAATCGTGAATCGGCGAGAAGATCTCGGATGCGAAAGCGTAACCACTTGGACCAACTCACTAAGCAGCTCTCACAGCTCGCAAAGAACAACGGCGAAATCCTCGCCACCATAGACATCACCACGCAGCACTATCTGAACGTTGAGGCAGAGAATTCCATTCTAAGGGCCCAAATGGGTGAGCTTAGCCAACGGCTCCAATCGCTCAACGACATCGTCCACGACATCATCATCAACACAACCACCACCTACGAAAGGGACTGTTATCTAACAAGCGCACAAAATTTCACCACCACCACCTACACGCTCTGTCTTAACCAACCCGTTTTTCAGTGGTGA 462 0.4935 MSMSMASSSGNSSISTKSQSSGSEGDLQVVITDERKNKRKQSNRESARRSRMRKRNHLDQLTKQLSQLAKNNGEILATIDITTQHYLNVEAENSILRAQMGELSQRLQSLNDIVHDIIINTTTTYERDCYLTSAQNFTTTTYTLCLNQPVFQW 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00279 153 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 33 96 IPR004827 GO:0003700|GO:0006355
Gma04g00279 153 CDD bZIP_plant_GBF1 36 86 IPR045314 GO:0003700|GO:0006355
Gma04g00279 153 PANTHER BZIP TRANSCRIPTION FACTOR 44 5 151 - -
Gma04g00279 153 Pfam bZIP transcription factor 35 86 IPR004827 GO:0003700|GO:0006355
Gma04g00279 153 SMART brlzneu 31 95 IPR004827 GO:0003700|GO:0006355
Gma04g00279 153 MobiDBLite consensus disorder prediction 1 58 - -
Gma04g00279 153 MobiDBLite consensus disorder prediction 1 27 - -
Gma04g00279 153 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 38 53 IPR004827 GO:0003700|GO:0006355
Gma04g00279 153 SUPERFAMILY Leucine zipper domain 35 88 IPR046347 GO:0003700|GO:0006355
Gma04g00279 153 MobiDBLite consensus disorder prediction 42 56 - -
Gma04g00279 153 Coils Coil 44 78 - -
Gma04g00279 153 PANTHER BZIP TRANSCRIPTION FACTOR 5 151 - -
Gma04g00279 153 Gene3D - 31 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00279 Gma-Chr4 2426326 2427372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00279 6 99 bZIP Transcription Factor Family AT1G75390 63.918 1.58e-32 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma04g00279 bZIP_1 7.9e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00279 K25786 - gmx:778188 264.233