Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00245 ATGGGGAAATCTACCTCCTGCTTCAAACTAATCACTTGCGGTGGTGATGCGGCTGAGAAGGACGATTACCACCAAGTATCTGAGATCAAGGAATCTAATGATAAACGTGGATGGAGTTTCCGCAAGAAGTCTGCAAGGCATCGTGTGCTTAGCAATACTGTGATAGCAGAGGCCCCATCTTCTGCAAATAAGGAAAGTTCAGAATGTAATAATTTTAATTTTCAACCACTTCCTGAACCTAATGTTGTTGAGAAGATTTACACAACAAATTGCTCTGATGAGAAGCCCCAGTTATCTTCCTTTGAAAGCTCACAAATAGAAGAAACAAATGTCATTGAAACTGAGGAGAAGGTGGATGTGAATCCACCAGAGTCTGAGGTCATCATCATCCAGGCTGCTATTAGAGGGTTATTGGCTCATAGAGAACTACTACAGCTTAAGAAAGTAGTGAAATTGCAAGCTGCTGTTCGTGGGCACTTGGTCCGGAGACATGCTGTAGGAACCCTGCGTTGTGTTCAAGCCATCATCAAAATGCAGATCCTTGTGCGAGCTCGTCGTGCTCGGCAGTCATGTCTGGAAAACCATTTAAATCAAAAGGATGGCAAAAGGGATTCCTCAGAAGCTTTGGGAAATGAAAATCTCATGACCAAATCAAATGTGAATTACACTTCCATTGAGAAGCTGCTTAGCAATAATAGGTTTGCTAGTCAGCTGTTGGAATCAACACCAAAGAACAAACCTATCCATTTCAAGTGTGATCCTTCTAAATCCGATTCTGCTTGGAAATGGTTGGAAAGGTGGATGTCAGTATCATCAAAAGATATTGCAGAGTGCAAAGAAATTAGTTCTCTGATAGAGCAATCAAGGGAAAGCAAAGATAGCACTCCCATGTTTCAATTCGAAATGGGTATTCCATCTGAACCTTTTCCCCAAGCAGTTGACTCGAAGCTCACTGTTGAAGATTCACTTCTGCCATCTGAGGATGAAGAAAAGTTGATTACTTGTGATGCTGATGACTTTGAGTTTCAAGCAAGCTACTCCACATCATCTATTGTAAAAGATGACTTGGTACAGGTTCCTCCTGAAGAAAAAATTGCATATGATGCCAAAGTTGCCTCAGACGATGCTGATTCCTTCCAAAACGAAAAATCAGCATCAGATGCAAGTGCCccatcagagcttaattctattcataaggggcctgaaattgccccaccatcagagcttaattctgttcataaggggcctgaaattgccccaccatcagagcataattctcttcagaaggggactgacattgccccaccatcagagcataattctcttcagaaggggactgacattgccccaccattagagcataactctcttcataagggacctgaaactgccccaccatcagagcTTAACTCTTTTAATCAGAAGCCTGAAATTGATGGTGAGCAGGGCAAACAATCCATGAAAAGATTTGCCTCAGACCAACTAGAGGCTGAAGGAAAGAAACCTGTAAATGGTTCAAGAAAGGTCAGTAATCCTGCATTTATTGCTGCACAGTCAAAATTCGAAGAGCTGAGCTCAATAGAAAATTCAGGTAGGACAAGCAGTTTGTCCTACCAAGATTCAGCTGTTGAATCACAAGGAGACACCTCTTCTGTTGGCAATGATACTGCATATAGATCAAAAGAGTTTGCATTTGAAAATCCTGCTGCTTATCTTTCTAGGTTTGCTGGTTCTGAATGTGGCACTGAACTCTCTATTTCTTCCACTCTTGATTCACCTGACATATCAGAGCCTGGCGCTATGGAAAATGAACGAGATGCCAAAGATTTAATGGAAGGGATTGGTAATCTTGAGAACACTATAAACCATGATGATGAGGCCAATGACAATGTTTCACGTGTCATCCCAGCTTCTAACCTAGCTACTTCTGTTTTGGATAAGTCAGAGATTGTTGATGACATTAGTGCCAATTTGGGTCACTCAGTGGTAGCTGTGGACTCTGAAGAGCCTGCTATTAAGACTGAGAAAAATGCACCTGACCTGCAGAGAGAGCTGCCAGAGTCTGTTCTGCAAGATTTAAGATCATCTCCAGAAGCTTCACCTAGAAGCCATTTAACTGTCCCTGAATCACAAGGAACGCCTTCAAGTGAAGTGTCTGTGAAACCTAAAGATAGCACTATCAACAAGACTAGATCTGGCAATAAACGTCGGAGCCTATCATTGAGTAACAAATCACCTACAAATCCAAATCATGATTCAGGCTCGAAAGACAGTAGGGAGCAACTGCCTAAAGATCAGCAGAATGGAAAGAGGCGCAATTCCTTTGGCTCAGTAAAGCCTGATAACATTGATCAAGAATCTAGAGATAATAGTACTAACAACAATTCTCTACCCCATTTCATGCAAGCTACAGAATCTGCTAGGGCCAAGGTTAATGCAAATAACTCTCCAAGATCAAGTCCAGATGTACATGAAGGAGATATCGAAGTTAAGAAGAGACATTCCTTACCTGGTGCCACTGGTAGGCAAGTTTCTCCACGCATCCAACGATCAACATCTAAGGCACAGCAGAGTGCAAAAGGAAACAATGTACATCCTCCTCAAGAGAGAAAATGGCTGAGGTGA 2625 0.381 MGKSTSCFKLITCGGDAAEKDDYHQVSEIKESNDKRGWSFRKKSARHRVLSNTVIAEAPSSANKESSECNNFNFQPLPEPNVVEKIYTTNCSDEKPQLSSFESSQIEETNVIETEEKVDVNPPESEVIIIQAAIRGLLAHRELLQLKKVVKLQAAVRGHLVRRHAVGTLRCVQAIIKMQILVRARRARQSCLENHLNQKDGKRDSSEALGNENLMTKSNVNYTSIEKLLSNNRFASQLLESTPKNKPIHFKCDPSKSDSAWKWLERWMSVSSKDIAECKEISSLIEQSRESKDSTPMFQFEMGIPSEPFPQAVDSKLTVEDSLLPSEDEEKLITCDADDFEFQASYSTSSIVKDDLVQVPPEEKIAYDAKVASDDADSFQNEKSASDASAPSELNSIHKGPEIAPPSELNSVHKGPEIAPPSEHNSLQKGTDIAPPSEHNSLQKGTDIAPPLEHNSLHKGPETAPPSELNSFNQKPEIDGEQGKQSMKRFASDQLEAEGKKPVNGSRKVSNPAFIAAQSKFEELSSIENSGRTSSLSYQDSAVESQGDTSSVGNDTAYRSKEFAFENPAAYLSRFAGSECGTELSISSTLDSPDISEPGAMENERDAKDLMEGIGNLENTINHDDEANDNVSRVIPASNLATSVLDKSEIVDDISANLGHSVVAVDSEEPAIKTEKNAPDLQRELPESVLQDLRSSPEASPRSHLTVPESQGTPSSEVSVKPKDSTINKTRSGNKRRSLSLSNKSPTNPNHDSGSKDSREQLPKDQQNGKRRNSFGSVKPDNIDQESRDNSTNNNSLPHFMQATESARAKVNANNSPRSSPDVHEGDIEVKKRHSLPGATGRQVSPRIQRSTSKAQQSAKGNNVHPPQERKWLR 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00245 874 MobiDBLite consensus disorder prediction 842 864 - -
Gma04g00245 874 MobiDBLite consensus disorder prediction 693 752 - -
Gma04g00245 874 MobiDBLite consensus disorder prediction 768 821 - -
Gma04g00245 874 MobiDBLite consensus disorder prediction 753 767 - -
Gma04g00245 874 Pfam IQ calmodulin-binding motif 127 143 IPR000048 GO:0005515
Gma04g00245 874 Pfam IQ calmodulin-binding motif 147 164 IPR000048 GO:0005515
Gma04g00245 874 MobiDBLite consensus disorder prediction 466 480 - -
Gma04g00245 874 Pfam Protein of unknown function (DUF4005) 789 856 IPR025064 -
Gma04g00245 874 SMART iq_5 145 166 IPR000048 GO:0005515
Gma04g00245 874 SMART iq_5 122 144 IPR000048 GO:0005515
Gma04g00245 874 MobiDBLite consensus disorder prediction 424 444 - -
Gma04g00245 874 PANTHER PROTEIN IQ-DOMAIN 32 1 864 - -
Gma04g00245 874 MobiDBLite consensus disorder prediction 664 874 - -
Gma04g00245 874 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Gma04g00245 874 MobiDBLite consensus disorder prediction 524 555 - -
Gma04g00245 874 MobiDBLite consensus disorder prediction 481 503 - -
Gma04g00245 874 MobiDBLite consensus disorder prediction 376 511 - -
Gma04g00245 874 Gene3D - 124 171 - -
Gma04g00245 874 PANTHER IQ-DOMAIN 5-RELATED 1 864 - -
Gma04g00245 874 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 192 IPR027417 -
Gma04g00245 874 MobiDBLite consensus disorder prediction 822 836 - -
Gma04g00245 874 ProSiteProfiles IQ motif profile. 145 174 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00245 Gma-Chr4 2114413 2120091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00245 454 874 IQD Protein Family AT1G19870 37.130 7.38e-52 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00245 - - gsj:114408593 1683.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00245 04 2114413 2120091 Gma04g00245 04 2114413 2120091 ECH
Gma04g00245 04 2114413 2120091 Gma06g00224 06 2003442 2009436 GST