Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00240 atgtcagcggcacttggaaaatgcagcagaatccgccacatagtcaggCTCCGCCAAATGCTGCGGCGGTGGCGTAGCAAGGCCCGTACGTCGGCCCACAGAATACCGTCTGATGTTCCAGCGGGACACGTGGCGGTGTGCGTGGGCAACAACTCGAAAAGATTTGTGGTGCGCACGACGTACCTGAACCATCCCGTGTTCAAGAGGCTACTGGTTGAGGCGGAGGAAGAGTACGGCTTCTCCAACCACGGTCCTCTCGCCATTCCCTGCGACGAAGCGATCTTCGAACAGCTCCTCCGCTTCGTTTCACACTCCGATGACTGCCACGTGCCTCTCAGAAACAACCTCGACTTCTACCTTGAATCTCGACCACTACTCCTCCACTGA 387 0.5065 MSAALGKCSRIRHIVRLRQMLRRWRSKARTSAHRIPSDVPAGHVAVCVGNNSKRFVVRTTYLNHPVFKRLLVEAEEEYGFSNHGPLAIPCDEAIFEQLLRFVSHSDDCHVPLRNNLDFYLESRPLLLH 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00240 128 Pfam Auxin responsive protein 16 101 IPR003676 GO:0009733
Gma04g00240 128 PANTHER SMALL AUXIN-UP RNA-RELATED 7 111 - -
Gma04g00240 128 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 111 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00240 Gma-Chr4 2089429 2090149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00240 5 115 Calmodulin-binding Proteins AT4G34750 53.982 2.15e-39 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00240 K14488 - gmx:100794795 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00240 04 2089429 2090149 Gma04g00240 04 2089429 2090149 ECH
Gma04g00240 04 2089429 2090149 Gma06g00221 06 1982419 1983083 GST
Gma17g02451 17 42519242 42520467 Gma04g00240 04 2089429 2090149 PCT
Gma14g02122 14 52370526 52371465 Gma04g00240 04 2089429 2090149 PCT
Gma04g00240 04 2089429 2090149 Gma17g02451 17 42519242 42520467 PCT
Gma04g00240 04 2089429 2090149 Gma14g02122 14 52370526 52371465 PCT