Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00238 ATGGCTTTGAGAAAATCAAGTAAACTTCCTCAGACAGCACTAATCAAGCAAATCCTCAAGAGGTGTTCGAGTTTAGGGAGGAAAGATGATCAAGGCCTTCTGGACGTGCCAAAGGGTCACTTTGTTGTATATGTTGGAGAAAACAGAAGCAGATATATTGTTCCTATTTCCTTCCTAAGTCGCCCTGAGTTCCAAACACTTCTCCACCAGGCTGAAGAAGAGTTTGGCTTTGATCACGAAAAGGGTCTCACTATTCCATGCGAAGAGGACGTTTTTGAGTCTCTCACCTCCATGCTCAGATGA 303 0.4389 MALRKSSKLPQTALIKQILKRCSSLGRKDDQGLLDVPKGHFVVYVGENRSRYIVPISFLSRPEFQTLLHQAEEEFGFDHEKGLTIPCEEDVFESLTSMLR 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00238 100 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 100 IPR003676 GO:0009733
Gma04g00238 100 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 100 - -
Gma04g00238 100 Pfam Auxin responsive protein 29 99 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00238 Gma-Chr4 2056145 2056770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00238 3 99 Calmodulin-binding Proteins AT4G34750 39.000 1.88e-21 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00238 K14488 - gmx:100778552 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00238 04 2056145 2056770 Gma11g00693 11 5790793 5791361 ECH
Gma04g00238 04 2056145 2056770 Gma01g01708 01 52780983 52781965 ECH
Gma04g00238 04 2056145 2056770 Gma02g00449 02 4524419 4524995 ECH
Gma04g00238 04 2056145 2056770 Gma16g01211 16 29808105 29808544 ECH
Gma04g00238 04 2056145 2056770 Gma04g00238 04 2056145 2056770 ECH