Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00214 ATGGAGTTGTGGAACGTGGTGTTTGTGTGTTGTGTTTTATGTTACAGTTTTTGTCACACTGCGGAGGCTATCGTTAAGCTACGAGGCAATGAAACAATACCAGCATTGATTTTGTTCGGGGATTCGATAGTTGACACAGGAAGTAACAATAACCTAATAACGGGGCTTAAGTGCAATTTTCCTCCTTATGGGAGGGATTTCGAGGGTGGGATACCAACAGGAAGATTCAGCAATGGCAAGGTCCCAGCTGACTTCGTAGCGGAAGAATTGGGAATCAAGGAATATATAGCACCATACACGAGTCCTGCTTTGCAGCCTGGTGATCTCCTCAGGGGAGTCAACTTCGCTTCTGGTGGCACGGGATATGATCCTTTGACCGCACAACTAGTGTCAGTCATACCGTTATCTGAGCAACTAGAGCAATTCAAAGAATACATAGGAAAGCTTAAAGGAAATTTTGGAGAAGCAAAAACCAACTTCATCTTGTCCAAAAGTTTAGTACTTGTGGTATCAAGCAGCAACGACATTGCCAATACTTATTTTGCAACTGGAGTAAGGAAACTGAATTATGATGTTCCCAATTACACTGATATGTTGGTGCAACAAGCCTCTTCTTTCGTTAAGGAATTATATGGATTGGGGGCAAGGAGAATAGGAGTGTTTGGTGCACCTCCACTAGGATGTTTGCCATTCGTGCGAGCATTGTTTGGAGGTCTACGAAGACTGTGCTCCGAAGAAATAAACATGGCATCAAAATTGTTTAACTCTAAACTATCTTCAGAGCTGCACAAGCTAAACCAAAGTTTGCCTCAAGCCAAGGTGGTGTATATCCATATTTACGACTCTTTGCTCAATATCATCCAAAACCCAACCAAATATGGATTTGAAGTTGCTGACAAAGGATGCTGCGGCACAGGGACTGTAGAGGCGGCTTTTCTGTGTAATATGTTAGATCCAACAACCTGCTCAGATGATTCTAAATATGTGTTTTGGGACAGCTACCATCCCACACAGAAGACATACCAGATTCTTGTTGGTGAAATCCTCAACAAATATACAAGCAACTTCTCTTGA 1074 0.4246 MELWNVVFVCCVLCYSFCHTAEAIVKLRGNETIPALILFGDSIVDTGSNNNLITGLKCNFPPYGRDFEGGIPTGRFSNGKVPADFVAEELGIKEYIAPYTSPALQPGDLLRGVNFASGGTGYDPLTAQLVSVIPLSEQLEQFKEYIGKLKGNFGEAKTNFILSKSLVLVVSSSNDIANTYFATGVRKLNYDVPNYTDMLVQQASSFVKELYGLGARRIGVFGAPPLGCLPFVRALFGGLRRLCSEEINMASKLFNSKLSSELHKLNQSLPQAKVVYIHIYDSLLNIIQNPTKYGFEVADKGCCGTGTVEAAFLCNMLDPTTCSDDSKYVFWDSYHPTQKTYQILVGEILNKYTSNFS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00214 357 Pfam GDSL-like Lipase/Acylhydrolase 37 344 IPR001087 GO:0016788
Gma04g00214 357 SUPERFAMILY SGNH hydrolase 36 353 - -
Gma04g00214 357 PANTHER GDSL ESTERASE/LIPASE EXL3 1 352 - -
Gma04g00214 357 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 352 - -
Gma04g00214 357 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 36 47 IPR008265 GO:0006629|GO:0016298
Gma04g00214 357 Gene3D SGNH hydrolase 22 355 IPR036514 -
Gma04g00214 357 CDD SGNH_plant_lipase_like 34 352 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00214 Gma-Chr4 1819136 1821089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00214 30 349 Pollen Coat Proteome AT1G75910 39.938 4.14e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00214 - - gmx:112997680 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00214 04 1819136 1821089 Gma04g00214 04 1819136 1821089 ECH
Gma04g00214 04 1819136 1821089 Gma06g00197 06 1717334 1727970 GST
Gma17g02479 17 42847944 42852721 Gma04g00214 04 1819136 1821089 PCT
Gma14g02153 14 52686967 52691875 Gma04g00214 04 1819136 1821089 PCT
Gma04g00214 04 1819136 1821089 Gma17g02477 17 42810631 42815771 PCT
Gma04g00214 04 1819136 1821089 Gma14g02151 14 52651994 52661114 PCT