Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00209 ATGGGCCCTGTTCCATGCCGTTGGAAAGGCACGTGTATGAAATCCTACTACTTCTATTCATCTAACTGTAACAGGAAGATAATTGGAGCAAGACATTACCCCGACCCTCAAGGAGACAGTGAGTATGAGACACCAAGGGATAAAAATGGGCACGGAACCCACGTGGCATCCACAGCGGCGGGAGCCACCGTTCCTGGTGCGTCATACTACGGTGTCGCGGCAGGGACCGCCCAAAGTGGGTCCCCAAAATCACTACTGGCGATTTACAAAGTGTGCTTCAAATATGAGTGCCCTGGCTCTGCTGTTCTTGCAGCGTTTGATGATGCCATTGCTGATGGAGTGGATGTGATTTCGTTGTCCGTTGCTTCCCTCTCCGAGTTGAAATATAACCCAATCGCCATTGGAGCATTCCACGCCGTCGAGCGCGGCATTCTCGTGGTTGCCTCCGCCGGAAACAACGGACCAAGCTTAAACACCGTTGTCAAAGATTATCCACTGATATATAGTGAGTCTGCCCAGGCAAAAGACGCCAAGTTATCTGACGCAAGACAATGCTTCCCATATTCATTAGATAAAGTCAAAGGGAAAATTGTGGTATGCGACGGCAAAGATCACTCATGCAACTATTTTAAAAGTTCAGGCTGTGCAAGGGTTTCAGTCATTGATTTTAAGCCTGCACCCATGATGCCATCCTTTGCAGCAAAAGGGCCTTCAGCAATTTCGAAGAATATTCTCAAGCCTGAGATTACAGCACCAGGAGTTAACATTCTTGCAGCATGGATTGGCAACGACAAAGAAGGAGTTCCAAAAGGGAAAAAGCCCTCCCAATTCAACATCAAATCGGGAACTTCCATGGCATGCTCACATGTTTCAGGACTTGCAGCTACCATCAAATCTCAGAACCCTACTTGGAGTGCCTCTGCAATCAAATCAGCAACCATGGCCACAGTAACTCAAGAAAACAATTTGAAGGCTCCCATAACAACGGATAAAGGATCAGTAGCCACACCTTATGACTATGGAGCAGGGCAAATGACAATATATGGAGCATTCCACCCAGGGCTAGTTTACGAAACCAACACTATTGACTACTTGAACTATTTATGTTACGTTGGATTTAATATAACCTTGGTTAAGACTATCTCTAGAAATGCTCCTAATAATTTGAGTTGCCCCAAGCATTCGAGTTCTCATCATATTTCCAACATCAATTACCCTTCCATCGCAATCTCCGATCTCAAAGGGAAAGAATTAGTGGACGTGAATATAACTGTAACAAACGTTGGTGAAGAGGATGAAACATTGTACTCCCCTGTTGTCGATGCTCCCATTGGGTAA 1338 0.4567 MGPVPCRWKGTCMKSYYFYSSNCNRKIIGARHYPDPQGDSEYETPRDKNGHGTHVASTAAGATVPGASYYGVAAGTAQSGSPKSLLAIYKVCFKYECPGSAVLAAFDDAIADGVDVISLSVASLSELKYNPIAIGAFHAVERGILVVASAGNNGPSLNTVVKDYPLIYSESAQAKDAKLSDARQCFPYSLDKVKGKIVVCDGKDHSCNYFKSSGCARVSVIDFKPAPMMPSFAAKGPSAISKNILKPEITAPGVNILAAWIGNDKEGVPKGKKPSQFNIKSGTSMACSHVSGLAATIKSQNPTWSASAIKSATMATVTQENNLKAPITTDKGSVATPYDYGAGQMTIYGAFHPGLVYETNTIDYLNYLCYVGFNITLVKTISRNAPNNLSCPKHSSSHHISNINYPSIAISDLKGKELVDVNITVTNVGEEDETLYSPVVDAPIG 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00209 445 Pfam Subtilase family 42 342 IPR000209 GO:0006508|GO:0008236
Gma04g00209 445 ProSitePatterns Serine proteases, subtilase family, histidine active site. 51 61 IPR022398 -
Gma04g00209 445 ProSiteProfiles Serine proteases, subtilase domain profile. 1 351 - -
Gma04g00209 445 CDD Peptidases_S8_3 1 316 IPR034197 -
Gma04g00209 445 MobiDBLite consensus disorder prediction 36 50 - -
Gma04g00209 445 MobiDBLite consensus disorder prediction 34 54 - -
Gma04g00209 445 Gene3D - 368 445 - -
Gma04g00209 445 SUPERFAMILY Subtilisin-like 22 351 IPR036852 GO:0004252|GO:0006508
Gma04g00209 445 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.1 226 443 - -
Gma04g00209 445 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.1 2 163 - -
Gma04g00209 445 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 163 IPR045051 -
Gma04g00209 445 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 226 443 IPR045051 -
Gma04g00209 445 PRINTS Subtilisin serine protease family (S8) signature 47 60 IPR015500 -
Gma04g00209 445 PRINTS Subtilisin serine protease family (S8) signature 281 297 IPR015500 -
Gma04g00209 445 Gene3D Peptidase S8/S53 domain 223 364 IPR036852 GO:0004252|GO:0006508
Gma04g00209 445 Gene3D Peptidase S8/S53 domain 1 163 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00209 Gma-Chr4 1773262 1776310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00209 1 445 Subtilisin-like Serine Gene Family AT1G20150 44.505 2.26e-140 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00209 K25898 - gmx:100820194 533.872