Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00170 ATGGCACATCAGCGCCGGCGCCACCACTATTACCAACGCTTCCGTCACATGATTCCAGTGTTTTCCGCCGTCGCCGCCGCGCTATTCTTTCTCTTCGCTCTCCTTTCGTTTTTAGCTCCTTCTCCCGTCGAAACCGATCGTATCCACCGGAGACGCCAACACACTTCGGTTAACGTTCAAAAGGATGATGCGATTGACAATCCTGCGTTCCGCGTTCCGGGTGATGGAGGAAAGTTGGGACGCGATATCTGGAGTTCTCTAAATTCGGAACACTTCTTTGGATGTAGCAATTCCAGCAACAAGTTTCAAAAAGCTCAAGTGATTACACAACCGAATCGGTATTTGATGATTGCAACAAGTGGAGGCTTGAATCAACAAAGAACTGGGATTACGGATGCTGTTGTTGCTGCACGAATTTTGAATGCTACTCTTGTGGTTCCAAAATTGGATCAACGATCTTTCTGGAAAGATTCTAGTAACTTCTCAGAGATCTTTGATGTTGATTGGTTTATATCATTTCTGTCAAAAGATGTCAAAATTATCAAGCAACTTCCCACTAAGGGTAGGAAAGCATTATCTGCATACAATATGCGGGTTCCAAGGAAGTGTAATGAAAGATGTTACATAAATCGCATATTACCTGTACTCCTTAAAAAGCATGCTGTTCAGCTCAGCAAGTTTGACTACAGGCTTGCTAACAGGTTGGATACAGAATATCAGAAGCTGAGATGTAGAGTTAATTACCATGCTTTAAGATTTACCAACCCAATACTTGCAATGGGTGAAAAATTGGTCCATCGGATGAGGATGAGAAGCAAGCATTATATTGCACTGCACCTGAGATTTGAACCTGATATGCTTGCATTTTCTGGATGTGATTATGGTGGAGGGGAGAAGGAGCAGAAGGAACTGGGTGCAATAAGAAGGAGGTGGAAGACATTACATAGAAGCAATCCTGATAGGGCAAGGAGGCAGGGGAGATGCCCATTAACCCCCGAAGAAGTTGGTCTCATGCTAAGAGCATTGGGATATGGTTCTGACATTCATATTTACGTTGCATCAGGGGAGGTATATGGAGGGGAAAGAACATTGGCACCTCTCAAAGCATTATTTCCTAATTTCCATTCAAAAGAGACCATTGCTACCAAGGAAGAATTAGAACCGTTTTCTTCATTTTCTTCTCGCATGGCTGCACTCGACTTCATTGTTTGTGATGAAAGTGATGTTTTTGTAACCAATAATAATGGAAATATGGCAAAAATATTGGCTGGACGAAGGAGATACTTTGGCCATAAACCAACCATTCGTCCAAATGCTAAAAAACTTTATCGATTGTTCTTGAATAGAAGTAATTCGACTTGGGAAGCTTTTGCTTCTAGTGTCCGAACTTTCCAGAAAGGCTTCATGGGAGAGCCAAAGGAGGTTAGACCAGGTAGAGGCGGGTTTCATGAGAATCCATCATCATGCATATGTGAAGATTCTGCAGCAGCCAAAGTGGACAAAAATTCACAATCTAGAAAATATGGGAAGGATAATACAACGAAGAAAAATGTAGCAAATGATGAACTGGATGTTGACAATGTGTCTGAGTGGCCAGACATGGATGATGATGACGATGATCAGAATGATCTAGCAGAGAAGGGTACATTCAATGAAACAATTTCGGATTATGATGCTCTGAACTTCGAGGATCCCGAGTTGGAGGAAATTATATCAGATTAG 1722 0.4216 MAHQRRRHHYYQRFRHMIPVFSAVAAALFFLFALLSFLAPSPVETDRIHRRRQHTSVNVQKDDAIDNPAFRVPGDGGKLGRDIWSSLNSEHFFGCSNSSNKFQKAQVITQPNRYLMIATSGGLNQQRTGITDAVVAARILNATLVVPKLDQRSFWKDSSNFSEIFDVDWFISFLSKDVKIIKQLPTKGRKALSAYNMRVPRKCNERCYINRILPVLLKKHAVQLSKFDYRLANRLDTEYQKLRCRVNYHALRFTNPILAMGEKLVHRMRMRSKHYIALHLRFEPDMLAFSGCDYGGGEKEQKELGAIRRRWKTLHRSNPDRARRQGRCPLTPEEVGLMLRALGYGSDIHIYVASGEVYGGERTLAPLKALFPNFHSKETIATKEELEPFSSFSSRMAALDFIVCDESDVFVTNNNGNMAKILAGRRRYFGHKPTIRPNAKKLYRLFLNRSNSTWEAFASSVRTFQKGFMGEPKEVRPGRGGFHENPSSCICEDSAAAKVDKNSQSRKYGKDNTTKKNVANDELDVDNVSEWPDMDDDDDDQNDLAEKGTFNETISDYDALNFEDPELEEIISD 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00170 573 PIRSF UCP009360 1 498 IPR024709 -
Gma04g00170 573 MobiDBLite consensus disorder prediction 526 543 - -
Gma04g00170 573 CDD O-FucT_plant 114 434 IPR024709 -
Gma04g00170 573 MobiDBLite consensus disorder prediction 502 523 - -
Gma04g00170 573 MobiDBLite consensus disorder prediction 502 550 - -
Gma04g00170 573 PANTHER O-FUCOSYLTRANSFERASE 16 5 573 - -
Gma04g00170 573 Pfam GDP-fucose protein O-fucosyltransferase 114 428 IPR019378 -
Gma04g00170 573 PANTHER O-FUCOSYLTRANSFERASE 16 5 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00170 Gma-Chr4 1456635 1463171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00170 83 492 Miscellaneous Gene Families AT1G22460 43.056 1.43e-100 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00170 - - gmx:100817698 1129.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00170 04 1456635 1463171 Gma01g01614 01 51830497 51837257 ECH
Gma04g00170 04 1456635 1463171 Gma04g00170 04 1456635 1463171 ECH