Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00157 ATGAGTTGCTTTTCGTGCTTTGTTTCTCGCCGGAAAGATGTGAGAAGGGTTGAAATTGACAATGGCTCTCGATCTGCTACCGCTACTGCTACTTCTTCTTCTGAGGGGAAGGGGAAGAAGAGTGTGAGTAGTAGCAGTAACAAAGGAAGTACGGCAGCGGCAAGTTTCGGTTTTCGCGAACTGGCAGAGGCAACGAGGGGTTTCAAGGAAGTGAACTTACTCGGGGAAGGTGGTTTTGGAAGGGTTTACAAGGGTCGTCTTGCAACGGGAGAGTATGTTGCCGTGAAACAATTGAGTCATGATGGTCGGCAAGGTTTTCAGGAGTTTGTGACGGAGGTTCTTATGTTGAGCCTGCTGCACAATTCTAATCTTGTCAAGTTAATTGGCTACTGCACTGATGGAGATCAAAGGCTTTTGGTTTATGAGTACATGCCCATGGGTTCACTTGAAGACCATCTATTTGatcctcacccagacaaagaaccactaagttggagtactcgaatgaagattgctgttggagctgctcgtggccttgaatatctccattgtaaagcagatccacctgttatctacagggacttgaaatctgcaaacatcttgttagataatgaattcaacccaaaactgtcagattttgggcttgctaaacttggacctgttggagacaatacccatgtttcaaccagagtgatgggaacatatggttactgtgcgccagagtatgccatgagcggcaaattaactcttaaatctgatatatatagctttggtgtggttttgttggagttgatcactggacgtagggcaatagatactaatagaagaccaggagagcaaaacttggtttcatggTCTCGTCAATTTTTCAGTGACCGGAAAAAGTTTGTACAAATGGTTgaccctctgttacacgaaaacttccccgtgcgctgtttgcatcaggcaatggctataactgctatgtgtatccaggagcaaccgaaattccgtccacttattggtgatattgttgttgcactGGAATACCTAGCTTCTCATAGTAATCCCTGA 1053 0.2336 MSCFSCFVSRRKDVRRVEIDNGSRSATATATSSSEGKGKKSVSSSSNKGSTAAASFGFRELAEATRGFKEVNLLGEGGFGRVYKGRLATGEYVAVKQLSHDGRQGFQEFVTEVLMLSLLHNSNLVKLIGYCTDGDQRLLVYEYMPMGSLEDHLFDPHPDKEPLSWSTRMKIAVGAARGLEYLHCKADPPVIYRDLKSANILLDNEFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRRAIDTNRRPGEQNLVSWSRQFFSDRKKFVQMVDPLLHENFPVRCLHQAMAITAMCIQEQPKFRPLIGDIVVALEYLASHSNP 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00157 350 ProSitePatterns Protein kinases ATP-binding region signature. 74 96 IPR017441 GO:0005524
Gma04g00157 350 Gene3D Phosphorylase Kinase; domain 1 39 143 - -
Gma04g00157 350 CDD STKc_IRAK 74 342 - -
Gma04g00157 350 SUPERFAMILY Protein kinase-like (PK-like) 52 342 IPR011009 -
Gma04g00157 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Gma04g00157 350 PANTHER OS07G0668900 PROTEIN 24 348 - -
Gma04g00157 350 ProSiteProfiles Protein kinase domain profile. 68 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00157 350 PANTHER OS07G0668900 PROTEIN 24 348 - -
Gma04g00157 350 Pfam Protein tyrosine and serine/threonine kinase 72 339 IPR001245 GO:0004672|GO:0006468
Gma04g00157 350 SMART serkin_6 68 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma04g00157 350 Gene3D Transferase(Phosphotransferase) domain 1 144 349 - -
Gma04g00157 350 MobiDBLite consensus disorder prediction 21 51 - -
Gma04g00157 350 PIRSF ILK 34 349 - -
Gma04g00157 350 MobiDBLite consensus disorder prediction 22 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00157 Gma-Chr4 1319967 1324172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00157 1 346 Glycoside Hydrolase AT3G07070 58.659 2.51e-148 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gma04g00157 PK_Tyr_Ser-Thr 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00157 - - gmx:100796595 636.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00157 04 1319967 1324172 Gma04g00157 04 1319967 1324172 ECH