Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00153 ATGGAAGCAGAGACCTCAAACGGTGGTGGTATTGGAGGCCTTTACGTCAAAGTTATGACCGACGACCAAATGGAACTGCTCAGGCAACAGATTTCTGTCTACGCCACCATCTGTGAACAGCTCGTTGAGATGCACAAGGCCGTCACTACCCAACAGGACCTCGCAGGGCTGAGGCTGGGTAATTTGTACTGTGATCCGTTGATGGCATGCTCTGGACACAAGATAACTGCGAGGCAGCGCTGGACTCCAACGCCTCTGCAGCTTCAAATACTTGAGCGTATTTTTGATGAGGGAAATGGCACTCCGAGCAAGCAGAAGATCAAAGACATAACCATTGAGCTGGGCCAGCATGGCCAAATATCAGAGACAAATGTTTATAACTGGTTCCAGAATAGAAGAGCTCGTTCAAAGCGGAAGCAACTCACTCCTGCACCCAATGTTGTGGAGCCAGAAGTTGAGTCTCCAAAAGAGAAAAAGACTCGTGCAGAAGGCTTTCAGGTTCAACCCTATGAGAATTCATCACCTCATAGGATCAAGGATATGTACATCCAGAGTCCTGACATAGGATTTGACCAATTACTGGGTAAAATAGAAGTTGCAAGCTGCTACAGTTCTTATTTTCTTTGA 627 0.4689 MEAETSNGGGIGGLYVKVMTDDQMELLRQQISVYATICEQLVEMHKAVTTQQDLAGLRLGNLYCDPLMACSGHKITARQRWTPTPLQLQILERIFDEGNGTPSKQKIKDITIELGQHGQISETNVYNWFQNRRARSKRKQLTPAPNVVEPEVESPKEKKTRAEGFQVQPYENSSPHRIKDMYIQSPDIGFDQLLGKIEVASCYSSYFL 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00153 208 PANTHER WUSCHEL-RELATED HOMEOBOX 13 1 208 IPR044559 GO:0003700
Gma04g00153 208 SMART HOX_1 76 143 IPR001356 GO:0003677
Gma04g00153 208 SUPERFAMILY Homeodomain-like 77 139 IPR009057 -
Gma04g00153 208 CDD homeodomain 78 140 IPR001356 GO:0003677
Gma04g00153 208 MobiDBLite consensus disorder prediction 136 172 - -
Gma04g00153 208 Pfam Homeodomain 78 138 IPR001356 GO:0003677
Gma04g00153 208 Gene3D - 79 143 - -
Gma04g00153 208 ProSiteProfiles 'Homeobox' domain profile. 74 139 IPR001356 GO:0003677
Gma04g00153 208 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 1 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00153 Gma-Chr4 1289528 1291635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00153 14 206 Wox Gene Family AT4G35550 54.867 3.41e-76 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gma04g00153 Homeodomain 9.4e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00153 - - gmx:100820530 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00153 04 1289528 1291635 Gma04g00153 04 1289528 1291635 ECH