Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g00147 ATGTACGATTTGGGAGCGACTATGCCTGTGGGAATGGATTTTCCTCCTCCGTTTACTATGTTAGAGGCCAAAGACAGTGCATTTGTGGTGGATGATCAGAAATCAGGGGATTTGAATGATATAAAACCGATGACTAAGGGTAAGCCTCCACGCCATGCTTCGACTTTGAGGCACAGCATTAGCAACACCAGATTGCTGGCCATATCAGATTTGAGTTTGGATGTGGGGGTTACTGGGAGCAAGTCATCTTCTGAAGAAAACACGGAGTTTCTACCAATACTTCGGTCAGGAAGCTGTGCTGAAAGAGGACCTAAACAATATATGGAAGACGAACACATATGTATAGATAATCTTATTCAGCATATAGGTCCTGCTTCAACTATTCCTTTACCTGGAGCTTTTTATGGGGTGTTTGATGGCCATGGGGGTACAGATGCAGCTTTGTTCATAAGAAATAACATCCTCAGATTCATAGTTGAGGACTCCCATTTTCCAACTTGCGTGGGGGAGGCAATTACAAGTGCGTTTGTAAAAGCTGATTATGCATTTGCAGATTCTAGTTCGCTTGATATCTCATCTGGCACCACTGCTTTAACTGCTCTTGTATTCGGAAGGACCATGATAGTTGCCAATGCTGGGGATTGTAGAGCTGTACTGGGGAGGCGTGGTAGAGCAATTGAGATGTCAAAAGACCAGAAACCAAATTGCATTTCAGAAAGGCTAAGGATTGAGAAACTTGGCGGGGTGGTATATGATGGATACTTGAATGGCCAGTTATCTGTTTCCCGTGCCTTAGGAGACTGGCACATGAAGGGTCACAAGGGTTCTGCCTACCCCTTGAGTGCTGAGCCAGAGCTGCAGGAAATCAACCTGACTGAGGATGATGAGTTCTTGATTATGGGCTGCGACGGCCTATGGGATGTAATGAGTAACCAATGTGCTGTAACCATGGCAAGGAAAGAATTGATGATACATAATGATCCTCAAAGGTGTTCAAGAGAGTTGGTCAGAGAGGCTCTTAAGCGTAACTCGTGTGATAATTTGACAGTTATCGTGATATGTTTCTCCCCAGATCCTCCTCCTAGGATAGAGACACCTCCTTCTCGAGTCAGGAGGAGTATATCGGCAGAAGGCCTCAATTTACTTAAGGGTGTATTGGACTGTTAG 1167 0.4482 MYDLGATMPVGMDFPPPFTMLEAKDSAFVVDDQKSGDLNDIKPMTKGKPPRHASTLRHSISNTRLLAISDLSLDVGVTGSKSSSEENTEFLPILRSGSCAERGPKQYMEDEHICIDNLIQHIGPASTIPLPGAFYGVFDGHGGTDAALFIRNNILRFIVEDSHFPTCVGEAITSAFVKADYAFADSSSLDISSGTTALTALVFGRTMIVANAGDCRAVLGRRGRAIEMSKDQKPNCISERLRIEKLGGVVYDGYLNGQLSVSRALGDWHMKGHKGSAYPLSAEPELQEINLTEDDEFLIMGCDGLWDVMSNQCAVTMARKELMIHNDPQRCSRELVREALKRNSCDNLTVIVICFSPDPPPRIETPPSRVRRSISAEGLNLLKGVLDC 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g00147 388 Gene3D - 72 358 IPR036457 -
Gma04g00147 388 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 8 377 - -
Gma04g00147 388 PANTHER PROTEIN PHOSPHATASE 2C 8 377 IPR015655 GO:0004722|GO:0006470
Gma04g00147 388 SMART PP2C_4 85 353 IPR001932 -
Gma04g00147 388 SUPERFAMILY PP2C-like 88 356 IPR036457 -
Gma04g00147 388 MobiDBLite consensus disorder prediction 34 56 - -
Gma04g00147 388 ProSiteProfiles PPM-type phosphatase domain profile. 95 355 IPR001932 -
Gma04g00147 388 Pfam Protein phosphatase 2C 96 347 IPR001932 -
Gma04g00147 388 ProSitePatterns PPM-type phosphatase domain signature. 134 142 IPR000222 GO:0043169
Gma04g00147 388 SMART PP2C_SIG_2 110 355 IPR001932 -
Gma04g00147 388 CDD PP2Cc 95 355 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g00147 Gma-Chr4 1247945 1251325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g00147 10 387 PP2C-type Phosphatase Gene Family AT2G33700 70.207 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g00147 K14803 - gmx:100778015 744.577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma04g00147 04 1247945 1251325 Gma04g00147 04 1247945 1251325 ECH
Gma04g00147 04 1247945 1251325 Gma06g00139 06 1218141 1221436 GST